BLASTX nr result
ID: Cephaelis21_contig00044431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00044431
(561 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 80 4e-26
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 79 8e-24
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 71 1e-23
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 72 2e-23
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 67 7e-23
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 80.5 bits (197), Expect(2) = 4e-26
Identities = 42/129 (32%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 13 EGLWLEDKEDISLEGQNFFKNLFGD-ELQYSNNYFKKLESLLTCIPKMLTE*DNLML*KF 189
+GL + ++DI E N+F++ Y ++LE+LL P +E D+ +L +
Sbjct: 117 DGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGMCVEELENLL---PFRCSEDDHRLLTRV 173
Query: 190 PTFEEVRDAVFAWNPESSAGPDGFSGTFFQACWDIVGHDVFLAVLDFFSGCPLSKAFSAT 369
T EE++ +F+ + S GPDG++ F++A W+I+G +V +A+ FF+ L K ++T
Sbjct: 174 VTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNST 233
Query: 370 LITLIPKKR 396
++ LIPKK+
Sbjct: 234 ILALIPKKK 242
Score = 62.8 bits (151), Expect(2) = 4e-26
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +2
Query: 380 LFQKKEQSQTFSDYRPISLCNFCYKILSKLMAIRLENFLPKIISHQQCGFVKGRLI*DNI 559
L KK++++ DYRPIS CN YK +SK++A RL+ LPK I Q FVK RL+ +N+
Sbjct: 237 LIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENV 296
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 79.3 bits (194), Expect(2) = 8e-24
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 IRNSEGLWLEDKEDISLEGQNFFKNLFGDELQYSNNYFKKLESLLTCIPKM-LTE*DNLM 177
I+NS G W+ K+DI E +F ++F Q+S Y+++L+ + IP++ L + ++L+
Sbjct: 380 IKNSAGKWVSSKQDIQGEFLGYFADIFQGS-QHSQEYWEELDGIRHLIPQIDLMQREDLI 438
Query: 178 L*KFPTFEEVRDAVFAWNPESSAGPDGFSGTFFQACWDIVGHDVFLAVLDFFSGCPLSKA 357
K T EEVR+ VF + GPDG F+Q W IVG D++ AV FF+ + +
Sbjct: 439 --KPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQE 496
Query: 358 FSATLITLIPK 390
++ T I LIPK
Sbjct: 497 WNQTNICLIPK 507
Score = 56.2 bits (134), Expect(2) = 8e-24
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +2
Query: 380 LFQKKEQSQTFSDYRPISLCNFCYKILSKLMAIRLENFLPKIISHQQCGFVKGRLI*DN 556
L K E+ + +RPISLCN YKI+SK++A RL+ L I++ Q FV GRLI DN
Sbjct: 504 LIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDN 562
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 71.2 bits (173), Expect(2) = 1e-23
Identities = 44/132 (33%), Positives = 68/132 (51%)
Frame = +1
Query: 1 IRNSEGLWLEDKEDISLEGQNFFKNLFGDELQYSNNYFKKLESLLTCIPKMLTE*DNLML 180
IRN G W ED++D++ ++F+NLF Q NN +++ +L + +T+ L
Sbjct: 380 IRNEAGEWFEDEDDVTECFAHYFENLF----QSGNNC--EMDPILNIVKPQITDELGTQL 433
Query: 181 *KFPTFEEVRDAVFAWNPESSAGPDGFSGTFFQACWDIVGHDVFLAVLDFFSGCPLSKAF 360
EEV A+ +P + GPDG + F+Q WD +G DV VL+ + A
Sbjct: 434 DAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAV 493
Query: 361 SATLITLIPKKR 396
+ T I LIPKK+
Sbjct: 494 NQTHIVLIPKKK 505
Score = 63.9 bits (154), Expect(2) = 1e-23
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +2
Query: 377 LLFQKKEQSQTFSDYRPISLCNFCYKILSKLMAIRLENFLPKIISHQQCGFVKGRLI*DN 556
+L KK+ ++ D+RPISLCN YKI++K++A R++ LP +I Q GFV GRLI DN
Sbjct: 499 VLIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDN 558
Query: 557 I 559
+
Sbjct: 559 V 559
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 72.0 bits (175), Expect(2) = 2e-23
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 IRNSEGLWLEDKEDISLEGQNFFKNLFGDELQYSNNYFK--KLESLLTCIPKMLTE*DNL 174
I +++G+ ++I E + FF+ LQ N F+ + L +P ++ D
Sbjct: 392 ILSNDGIVKTKGDEIKAEAERFFREF----LQLIPNDFEGVTITELQQLLPVRCSDADQQ 447
Query: 175 ML*KFPTFEEVRDAVFAWNPESSAGPDGFSGTFFQACWDIVGHDVFLAVLDFFSGCPLSK 354
L + T EE+R +F + S GPDG++ FF+A W+I+G + LAV FF+ L K
Sbjct: 448 SLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPK 507
Query: 355 AFSATLITLIPKK 393
++T++ LIPKK
Sbjct: 508 GINSTILALIPKK 520
Score = 62.4 bits (150), Expect(2) = 2e-23
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 380 LFQKKEQSQTFSDYRPISLCNFCYKILSKLMAIRLENFLPKIISHQQCGFVKGRLI*DNI 559
L KK +++ DYRPIS CN YK++SK++A RL+ LPK I+ Q FVK RL+ +N+
Sbjct: 516 LIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENL 575
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 66.6 bits (161), Expect(2) = 7e-23
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 377 LLFQKKEQSQTFSDYRPISLCNFCYKILSKLMAIRLENFLPKIISHQQCGFVKGRLI*DN 556
+L K ++ + D RPISLCN CYK++SK++A RL+ LP +IS Q FV GRLI DN
Sbjct: 746 VLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDN 805
Query: 557 I 559
I
Sbjct: 806 I 806
Score = 65.9 bits (159), Expect(2) = 7e-23
Identities = 42/130 (32%), Positives = 66/130 (50%)
Frame = +1
Query: 1 IRNSEGLWLEDKEDISLEGQNFFKNLFGDELQYSNNYFKKLESLLTCIPKMLTE*DNLML 180
+R +G W+E +ED FFK LF ++N + + LL + + ++ N L
Sbjct: 627 LRREDGSWVEREEDKRAMIIEFFKQLF------TSNGGQNSQKLLDVVDRKVSGAMNESL 680
Query: 181 *KFPTFEEVRDAVFAWNPESSAGPDGFSGTFFQACWDIVGHDVFLAVLDFFSGCPLSKAF 360
T EEV++A+ A + GPDG F++ACWD+VG V VL+ G + + +
Sbjct: 681 RAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGW 740
Query: 361 SATLITLIPK 390
+ I LIPK
Sbjct: 741 NDITIVLIPK 750