BLASTX nr result
ID: Cephaelis21_contig00044342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00044342
(659 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 92 2e-24
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 89 7e-21
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 89 7e-21
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 88 9e-21
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 88 9e-21
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 92.4 bits (228), Expect(2) = 2e-24
Identities = 48/140 (34%), Positives = 73/140 (52%)
Frame = -1
Query: 422 FFQHFWDVLTGDMMDAVSDFMAGSPLPRGVRATLITLLPKNQSPTTFADYRPISLCTFIS 243
F+Q +WD++ D++ +V DF L + + + LI L+PK DYRPI+L F
Sbjct: 469 FYQTYWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQF 528
Query: 242 KVFSMIXXXXXXXXXXXXXSDEQATFVKRQDISDNVLIAQEMVKHIDRTARGSNIIFKFD 63
K+ S I S EQ F++ +DIS V++A E + +++ G N+ K D
Sbjct: 529 KIISKILADRLADITMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYGGNVALKVD 588
Query: 62 ILKAFDRVS*PFLYDLLHRF 3
I KAFD + FL +L RF
Sbjct: 589 IAKAFDTLDWNFLLAVLQRF 608
Score = 46.2 bits (108), Expect(2) = 2e-24
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = -2
Query: 640 IATHAV*FFQTLLSPEHPYSQSSADPILQHITILLSDRDNEALLQPVELSELKAAVFSLD 461
I H + +FQ + S ++ Q+ D ++ I L+S+ DN +LL+ E+K AVF+L+
Sbjct: 398 IEVHVLNYFQAIFSVDNSCIQN--DLVVDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLN 455
Query: 460 PNSAAGSDGYPGSFFSTF 407
+ A G +G+ G F+ T+
Sbjct: 456 GDGAPGPNGFGGHFYQTY 473
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 88.6 bits (218), Expect(2) = 7e-21
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = -1
Query: 422 FFQHFWDVLTGDMMDAVSDFMAGSPLPRGVRATLITLLPKNQSPTTFADYRPISLCTFIS 243
F+Q W +L D++ AV +F + +P GV T I L+PK + P D+RPISLC +
Sbjct: 1026 FYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVY 1085
Query: 242 KVFSMIXXXXXXXXXXXXXSDEQATFVKRQDISDNVLIAQEMVKHIDRTARGSNI--IFK 69
K+ S S Q+ FV + I+DN LIA E HI R N +K
Sbjct: 1086 KIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYK 1145
Query: 68 FDILKAFDRVS*PFL 24
D+ KA+DRV FL
Sbjct: 1146 LDLSKAYDRVDWEFL 1160
Score = 37.7 bits (86), Expect(2) = 7e-21
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -2
Query: 574 SADPILQH--ITILL----SDRDNEALLQPVELSELKAAVFSLDPNSAAGSDGYPGSFF 416
+ADP + H +T L+ +D NE L + E+ A+F + P A G DG+PG F+
Sbjct: 969 TADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDGFPGRFY 1027
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 88.6 bits (218), Expect(2) = 7e-21
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = -1
Query: 422 FFQHFWDVLTGDMMDAVSDFMAGSPLPRGVRATLITLLPKNQSPTTFADYRPISLCTFIS 243
F+Q W +L D++ AV +F + +P GV T I L+PK + P D+RPISLC +
Sbjct: 991 FYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVY 1050
Query: 242 KVFSMIXXXXXXXXXXXXXSDEQATFVKRQDISDNVLIAQEMVKHIDRTARGSNI--IFK 69
K+ S S Q+ FV + I+DN LIA E HI R N +K
Sbjct: 1051 KIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYK 1110
Query: 68 FDILKAFDRVS*PFL 24
D+ KA+DRV FL
Sbjct: 1111 LDLSKAYDRVDWEFL 1125
Score = 37.7 bits (86), Expect(2) = 7e-21
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -2
Query: 574 SADPILQH--ITILL----SDRDNEALLQPVELSELKAAVFSLDPNSAAGSDGYPGSFF 416
+ADP + H +T L+ +D NE L + E+ A+F + P A G DG+PG F+
Sbjct: 934 TADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDGFPGRFY 992
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 88.2 bits (217), Expect(2) = 9e-21
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 434 LSWLFFQHFWDVLTGDMMDAVSDFMAGSPLPRGVRATLITLLPKNQSPTTFADYRPISLC 255
+S LFFQH+W + + V F A +P T + L+PK Q PT D RPISLC
Sbjct: 414 MSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLC 473
Query: 254 TFISKVFSMIXXXXXXXXXXXXXSDEQATFVKRQDISDNVLIAQEMVKHIDRTARGSN-- 81
+ + K+ S I SD Q+ FV + I+DN+L+A E+V + R S+
Sbjct: 474 SVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEF 533
Query: 80 IIFKFDILKAFDRVS*PFLYDLL 12
+ K D+ KA+DRV +L LL
Sbjct: 534 MAVKSDMSKAYDRVEWSYLRSLL 556
Score = 37.7 bits (86), Expect(2) = 9e-21
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -2
Query: 538 LSDRDNEALLQPVELSELKAAVFSLDPNSAAGSDGYPGSFFSTF 407
+S+ NE+L+ V E+K AVFS+ P SA G DG FF +
Sbjct: 379 VSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHY 422
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 88.2 bits (217), Expect(2) = 9e-21
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = -1
Query: 434 LSWLFFQHFWDVLTGDMMDAVSDFMAGSPLPRGVRATLITLLPKNQSPTTFADYRPISLC 255
+S LFFQH+W + + V F A +P T + L+PK Q PT D RPISLC
Sbjct: 417 MSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLC 476
Query: 254 TFISKVFSMIXXXXXXXXXXXXXSDEQATFVKRQDISDNVLIAQEMVKHIDRTARGSN-- 81
+ + K+ S I SD Q+ FV + I+DN+L+A E+V + R S+
Sbjct: 477 SVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEF 536
Query: 80 IIFKFDILKAFDRVS*PFLYDLL 12
+ K D+ KA+DRV +L LL
Sbjct: 537 MAVKSDMSKAYDRVEWSYLRSLL 559
Score = 37.7 bits (86), Expect(2) = 9e-21
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -2
Query: 538 LSDRDNEALLQPVELSELKAAVFSLDPNSAAGSDGYPGSFFSTF 407
+S+ NE+L+ V E+K AVFS+ P SA G DG FF +
Sbjct: 382 VSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHY 425