BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044199
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-129
emb|CBI32450.3| unnamed protein product [Vitis vinifera]              465   e-129
ref|XP_002521858.1| pentatricopeptide repeat-containing protein,...   458   e-126
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   440   e-121
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   437   e-120

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 762

 Score =  465 bits (1196), Expect = e-129
 Identities = 220/325 (67%), Positives = 270/325 (83%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            N+VT NTLIDA+CK+GR+DEA   +KSM  + + PN+I+YN I+NGLCREG +KE  EI 
Sbjct: 248  NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            EEM  KG  PDEVTYNTL+NGYCK+G+FHQALV+H+EM+RNG+ P+VVTYT+LI+SMCK 
Sbjct: 308  EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
            RN+ RAMEFFDQM+IRG+ PNERT+TTL+DGF +QGLL  AY++L EM  SGFSPS++TY
Sbjct: 368  RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
            NA I+GHC+   MEEAL V+Q+MV KGL P+VV+Y+T+ISGFCRK +LD+AFQ+KQ+MVE
Sbjct: 428  NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487

Query: 256  KGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKS 77
            KGV PDA+TYS+LIQGLC+ RRL E  +L QEM   GLPPD+ TYT+LIN YC EGD+  
Sbjct: 488  KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547

Query: 76   ALCLHHEMISKSFLPDVVTYRVLIN 2
            AL LH EMI K FLPD VTY VLIN
Sbjct: 548  ALHLHDEMIHKGFLPDAVTYSVLIN 572



 Score =  230 bits (587), Expect = 3e-58
 Identities = 114/320 (35%), Positives = 185/320 (57%), Gaps = 2/320 (0%)
 Frame = -2

Query: 955  LIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCRE-GRIK-ERTEIFEEMRK 782
            ++ ++  L  +D+AVN +         P V++YN++L+ + R  G +K    E++ EM +
Sbjct: 148  MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207

Query: 781  KGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNMPR 602
              + P+  TYN L+ G+C  G+  + L    EM RNG  PNVVTY +LI + CK   +  
Sbjct: 208  SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 267

Query: 601  AMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNALIN 422
            A      M  +G+ PN  ++  +++G C++G +  A+++L+EM   GF+P  +TYN L+N
Sbjct: 268  AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327

Query: 421  GHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKGVLP 242
            G+C  G   +AL +  +MVR G++P+VVTYT LI+  C+ R+L++A +    M  +G+ P
Sbjct: 328  GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387

Query: 241  DAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKSALCLH 62
            +  TY+TLI G   Q  L E Y +  EM   G  P   TY + I+G+C    ++ AL + 
Sbjct: 388  NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447

Query: 61   HEMISKSFLPDVVTYRVLIN 2
             EM+ K   PDVV+Y  +I+
Sbjct: 448  QEMVEKGLAPDVVSYSTIIS 467



 Score =  202 bits (515), Expect = 8e-50
 Identities = 108/339 (31%), Positives = 180/339 (53%), Gaps = 15/339 (4%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            ++VT   LI++ CK   ++ A+ F   M  R L PN  TY  +++G  R+G + E   I 
Sbjct: 353  SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM + G  P  VTYN  ++G+C      +AL +  EM+  GL P+VV+Y+++IS  C+ 
Sbjct: 413  NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 472

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
              + RA +   +M  +GV P+  T+++L+ G C+   LT A  + +EM+  G  P   TY
Sbjct: 473  GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 532

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
              LIN +C+ G + +AL +  +M+ KG  P+ VTY+ LI+G  ++    +A ++   ++ 
Sbjct: 533  TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 592

Query: 256  KGVLPDAITYSTLIQ---------------GLCDQRRLKEGYELFQEMWRKGLPPDKCTY 122
            +  +P  +TY TLI+               G C +  + E   +F+ M  +   P +  Y
Sbjct: 593  EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 652

Query: 121  TSLINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
              +I+G+C  G++  A  L+ EMI   F+P  VT   LI
Sbjct: 653  NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 691



 Score =  184 bits (468), Expect = 2e-44
 Identities = 108/363 (29%), Positives = 175/363 (48%), Gaps = 50/363 (13%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEEM 788
            T  TLID   + G ++EA   +  M E    P+V+TYNA ++G C   R++E   + +EM
Sbjct: 391  TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450

Query: 787  RKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNM 608
             +KGL PD V+Y+T+++G+C+ G+  +A  +  EM+  G+ P+ VTY+SLI  +C+ R +
Sbjct: 451  VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510

Query: 607  PRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNAL 428
              A +   +M   G+ P+E T+TTL++ +C +G L  A  +  EMI  GF P  +TY+ L
Sbjct: 511  TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 570

Query: 427  ING--------------------------------------------------HCLCGTM 398
            ING                                                   C+ G M
Sbjct: 571  INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 630

Query: 397  EEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKGVLPDAITYSTL 218
             EA RV + MV +   P    Y  +I G CR  +L KAF + ++M+  G +P  +T  TL
Sbjct: 631  HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 690

Query: 217  IQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKSALCLHHEMISKSF 38
            I+ L  +   +E  E+  +  R     +      L+     EG++++ L +  +M     
Sbjct: 691  IKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGL 750

Query: 37   LPD 29
            LP+
Sbjct: 751  LPN 753



 Score =  137 bits (345), Expect = 4e-30
 Identities = 73/218 (33%), Positives = 107/218 (49%), Gaps = 37/218 (16%)
 Frame = -2

Query: 544 FTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSII-------------------------- 443
           F  +V  +    ++  A   +    +SGF P ++                          
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 442 -----------TYNALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRD 296
                      TYN LI G C  G +++ L    +M R G  PNVVTY TLI  +C+   
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 295 LDKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTS 116
           +D+AF + + M  KG+ P+ I+Y+ +I GLC +  +KE +E+ +EM  KG  PD+ TY +
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 115 LINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLIN 2
           L+NGYC EG+   AL +H EM+     P VVTY  LIN
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362


>emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  465 bits (1196), Expect = e-129
 Identities = 220/325 (67%), Positives = 270/325 (83%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            N+VT NTLIDA+CK+GR+DEA   +KSM  + + PN+I+YN I+NGLCREG +KE  EI 
Sbjct: 44   NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 103

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            EEM  KG  PDEVTYNTL+NGYCK+G+FHQALV+H+EM+RNG+ P+VVTYT+LI+SMCK 
Sbjct: 104  EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
            RN+ RAMEFFDQM+IRG+ PNERT+TTL+DGF +QGLL  AY++L EM  SGFSPS++TY
Sbjct: 164  RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
            NA I+GHC+   MEEAL V+Q+MV KGL P+VV+Y+T+ISGFCRK +LD+AFQ+KQ+MVE
Sbjct: 224  NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283

Query: 256  KGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKS 77
            KGV PDA+TYS+LIQGLC+ RRL E  +L QEM   GLPPD+ TYT+LIN YC EGD+  
Sbjct: 284  KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343

Query: 76   ALCLHHEMISKSFLPDVVTYRVLIN 2
            AL LH EMI K FLPD VTY VLIN
Sbjct: 344  ALHLHDEMIHKGFLPDAVTYSVLIN 368



 Score =  204 bits (519), Expect = 3e-50
 Identities = 99/263 (37%), Positives = 154/263 (58%)
 Frame = -2

Query: 790 MRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRN 611
           M +  + P+  TYN L+ G+C  G+  + L    EM RNG  PNVVTY +LI + CK   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 610 MPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNA 431
           +  A      M  +G+ PN  ++  +++G C++G +  A+++L+EM   GF+P  +TYN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 430 LINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKG 251
           L+NG+C  G   +AL +  +MVR G++P+VVTYT LI+  C+ R+L++A +    M  +G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 250 VLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKSAL 71
           + P+  TY+TLI G   Q  L E Y +  EM   G  P   TY + I+G+C    ++ AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 70  CLHHEMISKSFLPDVVTYRVLIN 2
            +  EM+ K   PDVV+Y  +I+
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIIS 263



 Score =  202 bits (515), Expect = 8e-50
 Identities = 108/339 (31%), Positives = 180/339 (53%), Gaps = 15/339 (4%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            ++VT   LI++ CK   ++ A+ F   M  R L PN  TY  +++G  R+G + E   I 
Sbjct: 149  SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 208

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM + G  P  VTYN  ++G+C      +AL +  EM+  GL P+VV+Y+++IS  C+ 
Sbjct: 209  NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 268

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
              + RA +   +M  +GV P+  T+++L+ G C+   LT A  + +EM+  G  P   TY
Sbjct: 269  GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
              LIN +C+ G + +AL +  +M+ KG  P+ VTY+ LI+G  ++    +A ++   ++ 
Sbjct: 329  TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 388

Query: 256  KGVLPDAITYSTLIQ---------------GLCDQRRLKEGYELFQEMWRKGLPPDKCTY 122
            +  +P  +TY TLI+               G C +  + E   +F+ M  +   P +  Y
Sbjct: 389  EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 448

Query: 121  TSLINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
              +I+G+C  G++  A  L+ EMI   F+P  VT   LI
Sbjct: 449  NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487



 Score =  194 bits (493), Expect = 3e-47
 Identities = 105/308 (34%), Positives = 166/308 (53%), Gaps = 15/308 (4%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEEM 788
            T  TLID   + G ++EA   +  M E    P+V+TYNA ++G C   R++E   + +EM
Sbjct: 187  TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 787  RKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNM 608
             +KGL PD V+Y+T+++G+C+ G+  +A  +  EM+  G+ P+ VTY+SLI  +C+ R +
Sbjct: 247  VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306

Query: 607  PRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNAL 428
              A +   +M   G+ P+E T+TTL++ +C +G L  A  +  EMI  GF P  +TY+ L
Sbjct: 307  TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366

Query: 427  INGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLIS---------------GFCRKRDL 293
            ING        EA R++  ++ +   P+ VTY TLI                GFC K  +
Sbjct: 367  INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 426

Query: 292  DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
             +A ++ + MVE+   P    Y+ +I G C    L + + L++EM   G  P   T  +L
Sbjct: 427  HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486

Query: 112  INGYCGEG 89
            I     EG
Sbjct: 487  IKALFKEG 494



 Score =  162 bits (410), Expect = 1e-37
 Identities = 82/270 (30%), Positives = 143/270 (52%), Gaps = 15/270 (5%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            ++V+ +T+I   C+ G +D A    + MVE+ + P+ +TY++++ GLC   R+ E  ++ 
Sbjct: 254  DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            +EM   GL PDE TY TL+N YC +GD ++AL LH EM+  G  P+ VTY+ LI+ + K 
Sbjct: 314  QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 373

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVD---------------GFCQQGLLTGAYQVL 482
                 A     ++     +P++ T+ TL++               GFC +GL+  A +V 
Sbjct: 374  ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 433

Query: 481  KEMIASGFSPSIITYNALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRK 302
            + M+     P    YN +I+GHC  G + +A  + ++M+  G  P+ VT  TLI    ++
Sbjct: 434  ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493

Query: 301  RDLDKAFQIKQDMVEKGVLPDAITYSTLIQ 212
               ++  ++  D +    L +A     L++
Sbjct: 494  GMNEEMSEVIGDTLRSCRLNEAELAKVLVE 523


>ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538896|gb|EEF40494.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  458 bits (1178), Expect = e-126
 Identities = 217/325 (66%), Positives = 269/325 (82%)
 Frame = -2

Query: 976 NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
           N+VT NT+ID +CKL R DEA  F++SM  + L+PN+IT+N I+NGLCR+GR+KE +E+ 
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 796 EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            EM +KG VPDEVTYNTLVNGYCK+G+FHQALVLH+EM+RNGL PNVVTYTSLI+SMCK 
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 616 RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
            N+ RAMEFFDQM +RG+ PNERT+TT+++GF QQGLL  AY+VL EM  SGF PSI+TY
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 436 NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
           NALINGHC+ G MEEA+ ++QDMV KG+ P+VV+Y+T+ISGF R ++LD+AFQ+K +M+ 
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 256 KGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKS 77
           K VLPDA+TYS+LIQGLC+QRRL E  ++FQEM    LPPD+ TYT+LIN YC EGD+  
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 76  ALCLHHEMISKSFLPDVVTYRVLIN 2
           AL LH EMI K FLPD VTY VLIN
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLIN 341



 Score =  226 bits (575), Expect = 8e-57
 Identities = 118/338 (34%), Positives = 190/338 (56%), Gaps = 15/338 (4%)
 Frame = -2

Query: 970  VTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEE 791
            VT NTL++ +CK G   +A+     MV   L PNV+TY +++N +C+ G +    E F++
Sbjct: 89   VTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148

Query: 790  MRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRN 611
            M  +GL P+E TY T++NG+ + G   +A  + +EM R+G  P++VTY +LI+  C    
Sbjct: 149  MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208

Query: 610  MPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNA 431
            M  A+     M  +GV+P+  +++T++ GF +   L  A+Q+  EMI     P  +TY++
Sbjct: 209  MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268

Query: 430  LINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKG 251
            LI G C    + EA  + Q+M+   L P+  TYTTLI+ +C++ DL+KA  +  +M++KG
Sbjct: 269  LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328

Query: 250  VLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLI------------- 110
             LPDA+TY+ LI GL  Q R KE   L  +++     P   TY +LI             
Sbjct: 329  FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388

Query: 109  --NGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLIN 2
               G+C +G +  A  +   MI+K+  P+   Y V+I+
Sbjct: 389  LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIH 426



 Score =  210 bits (535), Expect = 4e-52
 Identities = 109/339 (32%), Positives = 187/339 (55%), Gaps = 15/339 (4%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            N+VT  +LI++ CK G ++ A+ F   M  R L PN  TY  I+NG  ++G + E   + 
Sbjct: 122  NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM + G +P  VTYN L+NG+C  G   +A+ L  +M+  G+ P+VV+Y+++IS   ++
Sbjct: 182  NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
            + + RA +   +M  + V+P+  T+++L+ G C+Q  LT A  + +EM+     P   TY
Sbjct: 242  QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
              LIN +C  G + +AL +  +M++KG  P+ VTY  LI+G  ++    +A ++   +  
Sbjct: 302  TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 256  KGVLPDAITYSTLIQ---------------GLCDQRRLKEGYELFQEMWRKGLPPDKCTY 122
               +P A+TY+TLI+               G C +  + E  ++F+ M  K   P++  Y
Sbjct: 362  DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 121  TSLINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
              +I+G+C  G++  A  L+ EM+   F+P  VT   L+
Sbjct: 422  NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460



 Score =  187 bits (475), Expect = 3e-45
 Identities = 99/308 (32%), Positives = 166/308 (53%), Gaps = 15/308 (4%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEEM 788
            T  T+I+   + G +DEA   +  M      P+++TYNA++NG C  GR++E   + ++M
Sbjct: 160  TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219

Query: 787  RKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNM 608
              KG++PD V+Y+T+++G+ ++ +  +A  +  EM+   + P+ VTY+SLI  +C+ R +
Sbjct: 220  VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279

Query: 607  PRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNAL 428
              A + F +M    + P+E T+TTL++ +C++G L  A  +  EMI  GF P  +TYN L
Sbjct: 280  TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVL 339

Query: 427  INGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLIS---------------GFCRKRDL 293
            ING       +EA R++  +      P+ VTY TLI                GFC K  +
Sbjct: 340  INGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLM 399

Query: 292  DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
            D+A Q+ + M+ K   P+   Y+ +I G C    + + Y+L++EM      P   T  +L
Sbjct: 400  DEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLAL 459

Query: 112  INGYCGEG 89
            +     EG
Sbjct: 460  VKALFTEG 467



 Score =  160 bits (406), Expect = 3e-37
 Identities = 98/339 (28%), Positives = 162/339 (47%), Gaps = 50/339 (14%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVI---------------------- 863
            ++VT N LI+ HC LGR++EA+  ++ MV + + P+V+                      
Sbjct: 192  SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMK 251

Query: 862  -------------TYNAILNGLCREGRIKERTEIFEEMRKKGLVPDEVTYNTLVNGYCKD 722
                         TY++++ GLC + R+ E  ++F+EM    L PDE TY TL+N YCK+
Sbjct: 252  VEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311

Query: 721  GDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNMPRAMEFFDQMKIRGVMPNERTF 542
            GD ++AL LH EM++ G  P+ VTY  LI+ + K      A     ++     +P+  T+
Sbjct: 312  GDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTY 371

Query: 541  TTLVD---------------GFCQQGLLTGAYQVLKEMIASGFSPSIITYNALINGHCLC 407
             TL++               GFC +GL+  A QV + MI     P+   YN +I+GHC  
Sbjct: 372  NTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRI 431

Query: 406  GTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKGVLPDAITY 227
            G + +A ++ ++MV     P+ VT   L+     +    +  ++  D++    L DA   
Sbjct: 432  GNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS 491

Query: 226  STLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLI 110
              L++    +  +   + L  EM + GL P   T T+ I
Sbjct: 492  KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
            gi|10177971|dbj|BAB11377.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 747

 Score =  440 bits (1132), Expect = e-121
 Identities = 201/325 (61%), Positives = 267/325 (82%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            N+VT NTLID +CKL ++D+    ++SM  + L+PN+I+YN ++NGLCREGR+KE + + 
Sbjct: 239  NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM ++G   DEVTYNTL+ GYCK+G+FHQALV+H+EMLR+GL P+V+TYTSLI SMCK 
Sbjct: 299  TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
             NM RAMEF DQM++RG+ PNERT+TTLVDGF Q+G +  AY+VL+EM  +GFSPS++TY
Sbjct: 359  GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
            NALINGHC+ G ME+A+ V++DM  KGL+P+VV+Y+T++SGFCR  D+D+A ++K++MVE
Sbjct: 419  NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 256  KGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKS 77
            KG+ PD ITYS+LIQG C+QRR KE  +L++EM R GLPPD+ TYT+LIN YC EGD++ 
Sbjct: 479  KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 76   ALCLHHEMISKSFLPDVVTYRVLIN 2
            AL LH+EM+ K  LPDVVTY VLIN
Sbjct: 539  ALQLHNEMVEKGVLPDVVTYSVLIN 563



 Score =  213 bits (543), Expect = 4e-53
 Identities = 110/339 (32%), Positives = 186/339 (54%), Gaps = 15/339 (4%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            +++T  +LI + CK G ++ A+ F+  M  R L PN  TY  +++G  ++G + E   + 
Sbjct: 344  SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM   G  P  VTYN L+NG+C  G    A+ +  +M   GL P+VV+Y++++S  C+ 
Sbjct: 404  REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
             ++  A+    +M  +G+ P+  T+++L+ GFC+Q     A  + +EM+  G  P   TY
Sbjct: 464  YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
             ALIN +C+ G +E+AL++  +MV KG+ P+VVTY+ LI+G  ++    +A ++   +  
Sbjct: 524  TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 256  KGVLPDAITYSTLIQ---------------GLCDQRRLKEGYELFQEMWRKGLPPDKCTY 122
            +  +P  +TY TLI+               G C +  + E  ++F+ M  K   PD   Y
Sbjct: 584  EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643

Query: 121  TSLINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
              +I+G+C  GDI+ A  L+ EM+   FL   VT   L+
Sbjct: 644  NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682



 Score =  209 bits (532), Expect = 8e-52
 Identities = 105/319 (32%), Positives = 178/319 (55%), Gaps = 1/319 (0%)
 Frame = -2

Query: 955  LIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGR-IKERTEIFEEMRKK 779
            ++ ++ +L  +D+A++ +         P V++YNA+L+   R  R I     +F+EM + 
Sbjct: 140  VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 778  GLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNMPRA 599
             + P+  TYN L+ G+C  G+   AL L  +M   G  PNVVTY +LI   CK R +   
Sbjct: 200  QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 598  MEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNALING 419
             +    M ++G+ PN  ++  +++G C++G +     VL EM   G+S   +TYN LI G
Sbjct: 260  FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 418  HCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKGVLPD 239
            +C  G   +AL +  +M+R GL P+V+TYT+LI   C+  ++++A +    M  +G+ P+
Sbjct: 320  YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 238  AITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKSALCLHH 59
              TY+TL+ G   +  + E Y + +EM   G  P   TY +LING+C  G ++ A+ +  
Sbjct: 380  ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 58   EMISKSFLPDVVTYRVLIN 2
            +M  K   PDVV+Y  +++
Sbjct: 440  DMKEKGLSPDVVSYSTVLS 458



 Score =  196 bits (498), Expect = 7e-48
 Identities = 103/336 (30%), Positives = 181/336 (53%), Gaps = 15/336 (4%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEEM 788
            T  TL+D   + G ++EA   ++ M +    P+V+TYNA++NG C  G++++   + E+M
Sbjct: 382  TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441

Query: 787  RKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNM 608
            ++KGL PD V+Y+T+++G+C+  D  +AL +  EM+  G++P+ +TY+SLI   C+ R  
Sbjct: 442  KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 607  PRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNAL 428
              A + +++M   G+ P+E T+T L++ +C +G L  A Q+  EM+  G  P ++TY+ L
Sbjct: 502  KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 427  INGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLIS---------------GFCRKRDL 293
            ING        EA R++  +  +   P+ VTY TLI                GFC K  +
Sbjct: 562  INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 292  DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
             +A Q+ + M+ K   PD   Y+ +I G C    +++ Y L++EM + G      T  +L
Sbjct: 622  TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681

Query: 112  INGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
            +     EG +     +   ++    L +    +VL+
Sbjct: 682  VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLV 717



 Score =  164 bits (416), Expect = 2e-38
 Identities = 86/296 (29%), Positives = 157/296 (53%), Gaps = 15/296 (5%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            ++V+ +T++   C+   VDEA+   + MVE+ + P+ ITY++++ G C + R KE  +++
Sbjct: 449  DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            EEM + GL PDE TY  L+N YC +GD  +AL LH+EM+  G+ P+VVTY+ LI+ + K 
Sbjct: 509  EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVD---------------GFCQQGLLTGAYQVL 482
                 A     ++     +P++ T+ TL++               GFC +G++T A QV 
Sbjct: 569  SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628

Query: 481  KEMIASGFSPSIITYNALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRK 302
            + M+     P    YN +I+GHC  G + +A  + ++MV+ G   + VT   L+    ++
Sbjct: 629  ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688

Query: 301  RDLDKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPD 134
              +++   +   ++    L +A     L++    +  +    ++  EM + G  P+
Sbjct: 689  GKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  130 bits (326), Expect = 6e-28
 Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 36/217 (16%)
 Frame = -2

Query: 544 FTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNA---------------------- 431
           F  +V  + +  L+  A  ++    A GF P +++YNA                      
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 430 --------------LINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDL 293
                         LI G C  G ++ AL +   M  KG  PNVVTY TLI G+C+ R +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 292 DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
           D  F++ + M  KG+ P+ I+Y+ +I GLC + R+KE   +  EM R+G   D+ TY +L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 112 INGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLIN 2
           I GYC EG+   AL +H EM+     P V+TY  LI+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 50/226 (22%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGL---------------- 836
            T   LI+A+C  G +++A+     MVE+ + P+V+TY+ ++NGL                
Sbjct: 522  TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581

Query: 835  ----------------------------------CREGRIKERTEIFEEMRKKGLVPDEV 758
                                              C +G + E  ++FE M  K   PD  
Sbjct: 582  FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641

Query: 757  TYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNMPRAMEFFDQM 578
             YN +++G+C+ GD  +A  L+ EM+++G   + VT  +L+ ++ K+  +         +
Sbjct: 642  AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701

Query: 577  KIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIIT 440
                 +        LV+   ++G +     VL EM   GF P+ I+
Sbjct: 702  LRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
            gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 747

 Score =  437 bits (1123), Expect = e-120
 Identities = 201/325 (61%), Positives = 262/325 (80%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            N+VT NTLID +CKL ++D+    ++SM  + L+PN+I+YN ++NGLCREGR+KE + + 
Sbjct: 239  NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
             EM K+G   DEVTYNTL+ GYCK+G+FHQALV+H+EMLR+GL P+V+TYTSLI SMCK 
Sbjct: 299  TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
             NM RA EF DQM++RG+ PNERT+TTLVDGF Q+G +  AY+VLKEMI +GFSPS++TY
Sbjct: 359  GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
            NALINGHC+ G M +A+ V++DM  KGL P+VV+Y+T++SGFCR  D+D+A ++K+ MV 
Sbjct: 419  NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478

Query: 256  KGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKS 77
            KG+ PD ITYS+LIQG C+QRR KE  +LF EM R GLPPD+ TYT+LIN YC EGD++ 
Sbjct: 479  KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQK 538

Query: 76   ALCLHHEMISKSFLPDVVTYRVLIN 2
            A+ LH+EM+ K  LPDVVTY VLIN
Sbjct: 539  AIQLHNEMVEKGVLPDVVTYSVLIN 563



 Score =  209 bits (531), Expect = 1e-51
 Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 15/339 (4%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            +++T  +LI + CK G ++ A  F+  M  R L PN  TY  +++G  ++G + E   + 
Sbjct: 344  SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            +EM   G  P  VTYN L+NG+C  G    A+ +  +M   GL P+VV+Y++++S  C+ 
Sbjct: 404  KEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRS 463

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITY 437
             ++  A+    +M  +G+ P+  T+++L+ GFC+Q     A  +  EM+  G  P   TY
Sbjct: 464  YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523

Query: 436  NALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVE 257
             ALIN +C+ G +++A+++  +MV KG+ P+VVTY+ LI+G  ++    +A ++   +  
Sbjct: 524  TALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFY 583

Query: 256  KGVLPDAITYSTLIQ---------------GLCDQRRLKEGYELFQEMWRKGLPPDKCTY 122
            +  +P  +TY TLI+               G C +  + E  ++F+ M  K   PD   Y
Sbjct: 584  EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAY 643

Query: 121  TSLINGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
              +I+G+C  GDI+ A  L+ EM+   FL   VT   L+
Sbjct: 644  NVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALV 682



 Score =  206 bits (525), Expect = 5e-51
 Identities = 105/319 (32%), Positives = 177/319 (55%), Gaps = 1/319 (0%)
 Frame = -2

Query: 955  LIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGR-IKERTEIFEEMRKK 779
            ++ ++ +L  +D+A++ +         P V++YNA+L+   R  R I     +F+EM + 
Sbjct: 140  VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS 199

Query: 778  GLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNMPRA 599
             + P+  TYN L+ G+C  G+   AL     M + G  PNVVTY +LI   CK R +   
Sbjct: 200  QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 598  MEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNALING 419
             E    M ++G+ PN  ++  +++G C++G +     VL EM   G+S   +TYN LI G
Sbjct: 260  FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319

Query: 418  HCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDLDKAFQIKQDMVEKGVLPD 239
            +C  G   +AL +  +M+R GL+P+V+TYT+LI   C+  ++++A +    M  +G+ P+
Sbjct: 320  YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379

Query: 238  AITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSLINGYCGEGDIKSALCLHH 59
              TY+TL+ G   +  + E Y + +EM   G  P   TY +LING+C  G +  A+ +  
Sbjct: 380  ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439

Query: 58   EMISKSFLPDVVTYRVLIN 2
            +M  K   PDVV+Y  +++
Sbjct: 440  DMKEKGLTPDVVSYSTVLS 458



 Score =  202 bits (515), Expect = 8e-50
 Identities = 106/336 (31%), Positives = 182/336 (54%), Gaps = 15/336 (4%)
 Frame = -2

Query: 967  TCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIFEEM 788
            T  TL+D   + G ++EA   +K M++    P+V+TYNA++NG C  G++ +   + E+M
Sbjct: 382  TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441

Query: 787  RKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKDRNM 608
            ++KGL PD V+Y+T+++G+C+  D  +AL +  +M+  G++P+ +TY+SLI   C+ R  
Sbjct: 442  KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 607  PRAMEFFDQMKIRGVMPNERTFTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNAL 428
              A + FD+M   G+ P+E T+T L++ +C +G L  A Q+  EM+  G  P ++TY+ L
Sbjct: 502  KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 427  INGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLIS---------------GFCRKRDL 293
            ING        EA R++  +  +   P+ VTY TLI                GFC K  +
Sbjct: 562  INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 292  DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
             +A Q+ + M+EK   PD   Y+ +I G C    +++ Y L++EM + G      T  +L
Sbjct: 622  TEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIAL 681

Query: 112  INGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLI 5
            +     EG +     +   ++    L +    +VL+
Sbjct: 682  VKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLV 717



 Score =  160 bits (406), Expect = 3e-37
 Identities = 84/296 (28%), Positives = 157/296 (53%), Gaps = 15/296 (5%)
 Frame = -2

Query: 976  NLVTCNTLIDAHCKLGRVDEAVNFMKSMVERNLDPNVITYNAILNGLCREGRIKERTEIF 797
            ++V+ +T++   C+   VDEA+   + MV + + P+ ITY++++ G C + R KE  ++F
Sbjct: 449  DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508

Query: 796  EEMRKKGLVPDEVTYNTLVNGYCKDGDFHQALVLHSEMLRNGLRPNVVTYTSLISSMCKD 617
            +EM + GL PDE TY  L+N YC +GD  +A+ LH+EM+  G+ P+VVTY+ LI+ + K 
Sbjct: 509  DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 616  RNMPRAMEFFDQMKIRGVMPNERTFTTLVD---------------GFCQQGLLTGAYQVL 482
                 A     ++     +P++ T+ TL++               GFC +G++T A QV 
Sbjct: 569  ARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628

Query: 481  KEMIASGFSPSIITYNALINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRK 302
            + M+     P    YN +I+GHC  G + +A  + ++MV+ G   + VT   L+    ++
Sbjct: 629  ESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKE 688

Query: 301  RDLDKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPD 134
              +++   +  +++    L +A     L++    +  +    ++  EM + G  P+
Sbjct: 689  GKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  131 bits (330), Expect = 2e-28
 Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 36/217 (16%)
 Frame = -2

Query: 544 FTTLVDGFCQQGLLTGAYQVLKEMIASGFSPSIITYNA---------------------- 431
           F  +V  + +  L+  A  ++    A GF P +++YNA                      
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 430 --------------LINGHCLCGTMEEALRVMQDMVRKGLNPNVVTYTTLISGFCRKRDL 293
                         LI G CL G ++ ALR    M +KG  PNVVTY TLI G+C+ R +
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 292 DKAFQIKQDMVEKGVLPDAITYSTLIQGLCDQRRLKEGYELFQEMWRKGLPPDKCTYTSL 113
           D  F++ + M  KG+ P+ I+Y+ +I GLC + R+KE   +  EM ++G   D+ TY +L
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 112 INGYCGEGDIKSALCLHHEMISKSFLPDVVTYRVLIN 2
           I GYC EG+   AL +H EM+     P V+TY  LI+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIH 353