BLASTX nr result

ID: Cephaelis21_contig00044140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044140
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea m...   105   5e-21
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   105   6e-21
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   105   6e-21
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic...   104   1e-20
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20

>tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  105 bits (263), Expect = 5e-21
 Identities = 42/65 (64%), Positives = 54/65 (83%)
 Frame = +3

Query: 3   LAVCFGLLNLPAGAPICVFKNIRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYCS 182
           LA+ FG++N P G P+ ++KN+RVC DCHS  K+ISKIT+R+II+RD  RFHHFK G+CS
Sbjct: 682 LAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCS 741

Query: 183 CGDFW 197
           CGDFW
Sbjct: 742 CGDFW 746


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  105 bits (262), Expect = 6e-21
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = +3

Query: 3   LAVCFGLLNLPAGAPICVFKNIRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYCS 182
           LAV FG+L +P G PI V KN+RVC DCHS +KHISKI  R IILRD++RFHHF +G+CS
Sbjct: 702 LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 183 CGDFW 197
           CGD+W
Sbjct: 762 CGDYW 766



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3    LAVCFGLLNLPAGAPICVFKN-IRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYC 179
            LA   G+L +P G P  V K  + VC DC S +KH+SKI  R I LRD+   H F +  C
Sbjct: 918  LAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESIC 974

Query: 180  SCGDFW 197
            SCG++W
Sbjct: 975  SCGEYW 980


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  105 bits (262), Expect = 6e-21
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = +3

Query: 3   LAVCFGLLNLPAGAPICVFKNIRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYCS 182
           LAV FG+L +P G PI V KN+RVC DCHS +KHISKI  R IILRD++RFHHF +G+CS
Sbjct: 702 LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 183 CGDFW 197
           CGD+W
Sbjct: 762 CGDYW 766


>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
           gi|125586550|gb|EAZ27214.1| hypothetical protein
           OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  104 bits (260), Expect = 1e-20
 Identities = 41/65 (63%), Positives = 54/65 (83%)
 Frame = +3

Query: 3   LAVCFGLLNLPAGAPICVFKNIRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYCS 182
           LA+ FG++N P   P+ ++KN+RVC DCH+  K+ISKIT+R+II+RD+ RFHHFK GYCS
Sbjct: 684 LAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCS 743

Query: 183 CGDFW 197
           CGDFW
Sbjct: 744 CGDFW 748


>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  104 bits (259), Expect = 1e-20
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = +3

Query: 3   LAVCFGLLNLPAGAPICVFKNIRVCSDCHSTMKHISKITKRDIILRDNYRFHHFKQGYCS 182
           LAV FG+L++P G PI V KN+RVC DCH+ +KHISKIT+R II+RD+ RFHHF +G CS
Sbjct: 712 LAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCS 771

Query: 183 CGDFW 197
           CGD+W
Sbjct: 772 CGDYW 776


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