BLASTX nr result

ID: Cephaelis21_contig00044044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044044
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...   111   5e-23
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   104   9e-21
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              104   9e-21
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   104   9e-21
dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]         103   1e-20

>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score =  111 bits (278), Expect = 5e-23
 Identities = 47/85 (55%), Positives = 66/85 (77%)
 Frame = -3

Query: 256 MMSEGYAWLITDSLGNFLNSIDDAVIDSMQGVIGLRPYVPNSKNLKNFRARWKKNMLLMN 77
           MMSEGYAWL+T  L   L+ +   V+DSM+GV+G++P+VP SK L++F++RW+KN  +  
Sbjct: 154 MMSEGYAWLVTAGLSTLLDPLGSEVMDSMRGVLGIKPHVPTSKKLESFKSRWRKNFTISK 213

Query: 76  PESIAIELNVYGYWAYDTVWALAMA 2
           P+S   ELN++G WAYDTVWA+AMA
Sbjct: 214 PQSKINELNLFGLWAYDTVWAIAMA 238


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 256 MMSEGYAWLITDSLGNFLNSIDDAVIDSMQGVIGLRPYVPNSKNLKNFRARWKKNMLLMN 77
           MM EGY W++TD L + L+++D  VIDSMQGV+G++P+VP +K L+NFR RWK+     +
Sbjct: 248 MMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIKPHVPRTKELENFRVRWKRKFQQDH 307

Query: 76  PESIAIELNVYGYWAYDTVWALAMA 2
           P+    ELN++G WAYD   ALAMA
Sbjct: 308 PKDETSELNIFGLWAYDAASALAMA 332


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 256 MMSEGYAWLITDSLGNFLNSIDDAVIDSMQGVIGLRPYVPNSKNLKNFRARWKKNMLLMN 77
           MM EGY W++TD L + L+++D  VIDSMQGV+G++P+VP +K L+NFR RWK+     +
Sbjct: 248 MMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIKPHVPRTKELENFRVRWKRKFQQDH 307

Query: 76  PESIAIELNVYGYWAYDTVWALAMA 2
           P+    ELN++G WAYD   ALAMA
Sbjct: 308 PKDETSELNIFGLWAYDAASALAMA 332


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 256 MMSEGYAWLITDSLGNFLNSIDDAVIDSMQGVIGLRPYVPNSKNLKNFRARWKKNMLLMN 77
           MM EGY W++TD L + L+++D  VIDSMQGV+G++P+VP +K L+NFR RWK+     +
Sbjct: 248 MMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIKPHVPRTKELENFRVRWKRKFQQDH 307

Query: 76  PESIAIELNVYGYWAYDTVWALAMA 2
           P+    ELN++G WAYD   ALAMA
Sbjct: 308 PKDETSELNIFGLWAYDAASALAMA 332


>dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]
          Length = 908

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/85 (51%), Positives = 64/85 (75%)
 Frame = -3

Query: 256 MMSEGYAWLITDSLGNFLNSIDDAVIDSMQGVIGLRPYVPNSKNLKNFRARWKKNMLLMN 77
           MMSEG+ W++TD++ N LNS++ +VI+SM+GVIG++PY P SK +++F  RWK      N
Sbjct: 166 MMSEGFVWIVTDAMANQLNSMNVSVIESMEGVIGVKPYAPKSKKVEDFTQRWKMKFRKEN 225

Query: 76  PESIAIELNVYGYWAYDTVWALAMA 2
           P  + +EL++YG WAYD+  ALAMA
Sbjct: 226 PTMVDVELDIYGLWAYDSATALAMA 250


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