BLASTX nr result

ID: Cephaelis21_contig00044027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044027
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    61   8e-08
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    60   2e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   3e-07
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    59   4e-07
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo...    59   4e-07

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/88 (39%), Positives = 48/88 (54%)
 Frame = -2

Query: 285 FLRL*LLKFGFYMCFVNLVINNLKGSWFFVSFNGSSTSFFQASRGLKQGDHLLPYLFILL 106
           FL L L  FGF   F N +   L  S  F+S NG+   FF  +RG++QGD L P LF ++
Sbjct: 335 FLLLVLKTFGFNELFCNWIKTILHSSKMFISMNGAQHGFFNCNRGVRQGDPLSPLLFCIV 394

Query: 105 VEVLSCGLSLLAQNRKLASYAYPRGSIM 22
            EVLS  +S+LA    +   A  R + +
Sbjct: 395 EEVLSRSISILADKGLIDLIAASRNNCL 422


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
           gi|241936686|gb|EES09831.1| hypothetical protein
           SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = -2

Query: 285 FLRL*LLKFGFYMCFVNLVINNLKGSWFFVSFNGSSTSFFQASRGLKQGDHLLPYLFILL 106
           +LR  +++ GF+  FV +++  +  + F V FNG     F+ SRG++QGD + PYLF+L 
Sbjct: 766 YLRAIMIRLGFHRLFVEMIMRLVTTASFSVLFNGECLDSFKPSRGIRQGDPISPYLFLLA 825

Query: 105 VEVLSCGLSLLAQNRKL 55
            E LSC L    Q+  L
Sbjct: 826 AEGLSCLLKSRNQSSVL 842


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/85 (41%), Positives = 49/85 (57%)
 Frame = -2

Query: 285 FLRL*LLKFGFYMCFVNLVINNLKGSWFFVSFNGSSTSFFQASRGLKQGDHLLPYLFILL 106
           FL   L +FGF   FV+ ++  L+ +   V  NG +  FF  S G++QGD L P LF L+
Sbjct: 600 FLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLV 659

Query: 105 VEVLSCGLSLLAQNRKLASYAYPRG 31
            EVLS  LS+ A + +L   +Y RG
Sbjct: 660 EEVLSRALSMAATDGQLIPMSYCRG 684


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1188

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = -2

Query: 285 FLRL*LLKFGFYMCFVNLVINNLKGSWFFVSFNGSSTSFFQASRGLKQGDHLLPYLFILL 106
           FL   + K GF  C+VN +++ +    + V FNG+  S F  SRGL+QGD L P+LF+ +
Sbjct: 452 FLEQSMYKLGFAHCWVNWIMSCITSVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFV 511

Query: 105 VEVLSCGLSLLAQNR 61
           V+    GLSLL + R
Sbjct: 512 VD----GLSLLLEER 522


>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
          Length = 787

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = -2

Query: 285 FLRL*LLKFGFYMCFVNLVINNLKGSWFFVSFNGSSTSFFQASRGLKQGDHLLPYLFILL 106
           FL   + K GF  C+VN +++ +    + V FNG+  S F  SRGL+QGD L P+LF+ +
Sbjct: 452 FLEQSMYKLGFAHCWVNWIMSCITSVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFV 511

Query: 105 VEVLSCGLSLLAQNR 61
           V+    GLSLL + R
Sbjct: 512 VD----GLSLLLEER 522


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