BLASTX nr result

ID: Cephaelis21_contig00043986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043986
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004102881.1| ribonuclease H [Thermaerobacter marianensis ...    63   2e-08
ref|ZP_11319844.1| putative SAM-dependent methyltransferase [The...    62   5e-08
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|ACV72190.1| ribonuclease H [uncultured organism]                    58   9e-07

>ref|YP_004102881.1| ribonuclease H [Thermaerobacter marianensis DSM 12885]
           gi|315592858|gb|ADU52154.1| ribonuclease H
           [Thermaerobacter marianensis DSM 12885]
          Length = 140

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/67 (43%), Positives = 43/67 (64%)
 Frame = +2

Query: 143 WKLNVDGSSRGNPGPAGGGIVIRRMCGSVYKAQAQFFGVGTSLAAEARALLSGLQLCVSE 322
           W+L+ DG++RGNPGPAG G+V+    G V +  A+F G  T+  AE  AL++GLQ  +  
Sbjct: 8   WRLHTDGAARGNPGPAGIGVVLIDPRGQVAERVARFIGTATNNVAEYTALITGLQRALEH 67

Query: 323 GLHNIEI 343
           G   +E+
Sbjct: 68  GARRLEV 74


>ref|ZP_11319844.1| putative SAM-dependent methyltransferase [Thermaerobacter
           subterraneus DSM 13965] gi|410505558|gb|EKP95067.1|
           putative SAM-dependent methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
          Length = 504

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/67 (41%), Positives = 44/67 (65%)
 Frame = +2

Query: 143 WKLNVDGSSRGNPGPAGGGIVIRRMCGSVYKAQAQFFGVGTSLAAEARALLSGLQLCVSE 322
           W+L+ DG++RGNPGPAG G+V+    G+V +  A+F G  T+  AE  AL++GLQ  +  
Sbjct: 364 WRLHTDGAARGNPGPAGIGVVLIGPDGAVAERIARFIGAATNNVAEYTALITGLQRALDR 423

Query: 323 GLHNIEI 343
           G   +++
Sbjct: 424 GARRLDV 430


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +2

Query: 110 TPVFWSHPQRQW-KLNVDGSSRGNPGPAGGGIVIRRMCGSVYKAQAQFFGVGTSLAAEAR 286
           T V W +PQ +  KLNVDG S+GNPG AG G VIR   G+     A+  G+ +S+ AE  
Sbjct: 72  TQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELW 131

Query: 287 ALLSGLQLCVSEGLHNIEI 343
           A+  GLQL    G   +++
Sbjct: 132 AVYVGLQLAWDRGFRKVDL 150


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +2

Query: 110 TPVFWSHPQRQW-KLNVDGSSRGNPGPAGGGIVIRRMCGSVYKAQAQFFGVGTSLAAEAR 286
           T V W +PQ +  KLNVDG S+GNPG AG G VIR   G+     A+  G+ +S+ AE  
Sbjct: 72  TQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELW 131

Query: 287 ALLSGLQLCVSEGLHNIEI 343
           A+  GLQL    G   +++
Sbjct: 132 AVYVGLQLAWDRGFRKVDL 150


>gb|ACV72190.1| ribonuclease H [uncultured organism]
          Length = 161

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +2

Query: 158 DGSSRGNPGPAGGGIVIRRMCGSVYKAQAQFFGVGTSLAAEARALLSGLQLCVSEGLHNI 337
           DG+SR NPGPA  G+V++R  G +  + A++ G  T+  AE RALL GL+   + G+ N+
Sbjct: 35  DGASRNNPGPAAIGVVLKRPTGELLASDAEYIGKTTNNVAEYRALLRGLERARALGVRNL 94

Query: 338 EI 343
           E+
Sbjct: 95  EV 96


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