BLASTX nr result

ID: Cephaelis21_contig00043810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043810
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   212   1e-52
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   189   8e-46
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   184   3e-44
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   177   3e-42
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...   169   1e-39

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  212 bits (540), Expect = 1e-52
 Identities = 126/360 (35%), Positives = 191/360 (53%), Gaps = 28/360 (7%)
 Frame = +1

Query: 25   FSNMFSPDKNYDFLKISQIPTDVGKSGYSDSINQRGFSSSSSNKIVTGATSDGTLQATHA 204
            +SN       + F K S I T   K G  D ++     ++ S + V      G L++++ 
Sbjct: 176  YSNFRCAGNGFGFPKASGILTHAVKLGLEDILHH----TNRSFEEVDSGFPLGRLRSSNN 231

Query: 205  IPTDHQHQTPNGIYLQGLREYIAERNGVLPDDWRVEFEFCNNRLKTFAIYISPDGSRFES 384
                   Q P+ + LQ L+E+I+ER+GVL + WRVE +      +   ++ +PDG  FES
Sbjct: 232  TACRLPPQEPSEMLLQALKEFISERHGVLEEGWRVELKQSVRAGELCPVFCAPDGRIFES 291

Query: 385  MSDVAQHLGLPTNFHPLQTE---SAEISMPHASHTSQGKESSGATKANNSRQRQ------ 537
            MS+VA +LGL +N + + TE       S+   SH S+ ++S+  + AN+S + +      
Sbjct: 292  MSEVAVYLGLTSNCNSVDTEIRSDGSASLKKRSHLSKRRKSTRLSIANSSAENKDALLTD 351

Query: 538  -----------------NITRGXXXXXXXXXXXXXXXXRQE--GFPVQFEDFFLISAGTI 660
                             N+                   +Q   G PVQFEDFF++S G +
Sbjct: 352  FCKDISSDVQSMELCASNLGNSVKVTEAAPEENGGTGLQQHNNGLPVQFEDFFVLSLGEV 411

Query: 661  DLRPSYHNAHQIWPVGYRSSWHDKITGSLFIFDISDGGDSGPVFTVRRCPCTIQSIPIGS 840
            D+RPSYH+ +Q+WPVGY+S WHDK+TGSLF+ D+SDGGDSGP+F V+RC C+   +P GS
Sbjct: 412  DVRPSYHDVNQLWPVGYKSCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGS 471

Query: 841  TVLVREKLVSSNGEVNAGKDDSAAFSAIDEESVSIQMMLTESSPPLLEDEISSTKMQTEG 1020
            TVL R  L  SNG+     +D  + S   +E  S+Q +L + SPP+  D +S  +  + G
Sbjct: 472  TVLCRPNLGQSNGQDKEKSNDMISLSMDYDEDGSLQTLLADPSPPMENDILSCIRSSSNG 531


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  189 bits (481), Expect = 8e-46
 Identities = 124/393 (31%), Positives = 190/393 (48%), Gaps = 25/393 (6%)
 Frame = +1

Query: 31   NMFSPDKNYDFLKISQIPTDVGKSGYSDSINQRGFSSSSSNKIVTGATSDGTLQATHAIP 210
            N F P   +DF K S +     K G  D ++       S  +I  G    G  +++++  
Sbjct: 203  NGFGP---FDFRKASGLMMKAFKVGVEDILHHAQTVDRSLEEIDLGFPL-GRFRSSNSTA 258

Query: 211  TDHQHQTPNGIYLQGLREYIAERNGVLPDDWRVEFEFCNNRLKTFAIYISPDGSRFESMS 390
                 ++PN I LQGLRE+I+ER+G+L + W VE +   +  + F  Y SPDG  F SM+
Sbjct: 259  NKLPSRSPNEILLQGLREFISERHGILDEGWHVELKNSVSGCEVFVAYCSPDGKTFGSMA 318

Query: 391  DVAQHLGLPTNFHPLQTESAEISMPHASHTSQGKESSGATKANN-SRQRQNITRGXXXXX 567
            +VA +LGL     P        S+    H  + +++   + AN  +  +Q +  G     
Sbjct: 319  EVACYLGLT----PSTRSDGSPSLQERLHLPKKRKTKRFSLANGYAETKQALINGYHKGL 374

Query: 568  XXXXXXXXXXXRQ---------------------EGFPVQFEDFFLISAGTIDLRPSYHN 684
                        +                     EG P+QFEDFF+IS G ID RPSYH 
Sbjct: 375  LSNGQSIEIGDSKFGKVTEANMEEEDIAKSLPSDEGLPLQFEDFFVISLGKIDGRPSYHG 434

Query: 685  AHQIWPVGYRSSWHDKITGSLFIFDISDGGDSGPVFTVRRCPCTIQSIPIGSTVLVREKL 864
               IWPVGYRS WHD++TGSLFI ++ DGGDSGP+F VRR  C+   IP+GST+L R   
Sbjct: 435  PQLIWPVGYRSCWHDRVTGSLFICEVLDGGDSGPIFKVRRFSCSSIPIPVGSTILYRRNP 494

Query: 865  VSSNGEVNAGKDDSAAFSAIDEESVSIQMMLTESSPPLLEDEISSTKMQTEGLDSQKSNT 1044
                G+ +   +D   +    +   SI+M+L +SSPP  +D ++     ++ +   +++ 
Sbjct: 495  YQFAGQNSKEYNDVINYDMDRDNDGSIEMILADSSPPTEDDIMTCLSYTSKKVCDVRTSD 554

Query: 1045 SSSESFSQKSGNHISNILGTKDSIG---EFRVE 1134
                S    S   ++    +   +G   E++VE
Sbjct: 555  CLQRSSLHNSFASLAKFCSSPSLVGIPFEYQVE 587


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 1028

 Score =  184 bits (468), Expect = 3e-44
 Identities = 115/342 (33%), Positives = 177/342 (51%), Gaps = 24/342 (7%)
 Frame = +1

Query: 181  GTLQATHAIPTDHQHQTPNGIYLQGLREYIAERNGVLPDDWRVEFEFCNNRLKTFAIYIS 360
            G+ +++         Q  + ++LQ LRE+I+ERNGVL + W VE +   +  + +AIY +
Sbjct: 352  GSCRSSRGTSVKLSSQNTSEVFLQALREFISERNGVLEEGWCVEIKQSVDSSELYAIYRA 411

Query: 361  PDGSRFESMSDVAQHLGLPTNFHPLQTESAEISMPHASHTSQGKESSGATKAN------- 519
            PDG  F S+ +VA HLGL ++  P         +   S+  + ++ +  + AN       
Sbjct: 412  PDGKTFGSVYEVACHLGLMSSMQPKARRQGSSHLSGKSYIPKRRKPTKFSVANGFVDNNE 471

Query: 520  ---NSR------QRQNIT-------RGXXXXXXXXXXXXXXXXRQEGFPVQFEDFFLISA 651
               N R       RQ+ +                           EGFP+QFEDFF++S 
Sbjct: 472  TLINDRCKGVLCDRQSPSGVTVVNLENSEEAVAEENGGSISSQCYEGFPLQFEDFFVLSL 531

Query: 652  GTIDLRPSYHNAHQIWPVGYRSSWHDKITGSLFIFDISDGGDSGPVFTVRRCPCTIQSIP 831
            G ID RPSYH   +++PVG+RS WHDK+TGS+FI ++ DGGDSGP+F VRRCPC+   IP
Sbjct: 532  GEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIP 591

Query: 832  IGSTVLVREKLVSSNGEVNAGKDDSAAFSAIDEESVSIQMMLTESSPPLLEDEISSTKMQ 1011
            +GSTVL + K  S N  +   K+D    ++ D+   ++Q + ++  PP  +D +S   + 
Sbjct: 592  VGSTVLSKGK--SENFSIEQQKEDGLINNSNDD---NLQTIFSDVCPPNEDDILSCLGVC 646

Query: 1012 TE-GLDSQKSNTSSSESFSQKSGNHISNILGTKDSIGEFRVE 1134
            ++   +    N    E+ S      +S+    KD IGE  VE
Sbjct: 647  SDRDFNVHMQNGLHDEAGSIGKSGDLSDYQYLKDEIGEISVE 688


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score =  177 bits (450), Expect = 3e-42
 Identities = 104/295 (35%), Positives = 159/295 (53%), Gaps = 23/295 (7%)
 Frame = +1

Query: 181  GTLQATHAIPTDHQHQTPNGIYLQGLREYIAERNGVLPDDWRVEFEFCNNRLKTFAIYIS 360
            G+ +++         Q  + ++LQ LRE+I+ERNGVL + W VE +   +  + +AIY +
Sbjct: 241  GSCRSSRGTSVKLSSQNTSEVFLQALREFISERNGVLEEGWCVEIKQSVDSSELYAIYRA 300

Query: 361  PDGSRFESMSDVAQHLGLPTNFHPLQTESAEISMPHASHTSQGKESSGATKAN------- 519
            PDG  F S+ +VA HLGL ++  P         +   S+  + ++ +  + AN       
Sbjct: 301  PDGKTFGSVYEVACHLGLMSSMQPKARRQGSSHLSGKSYIPKRRKPTKFSVANGFVDNNE 360

Query: 520  ---NSR------QRQNIT-------RGXXXXXXXXXXXXXXXXRQEGFPVQFEDFFLISA 651
               N R       RQ+ +                           EGFP+QFEDFF++S 
Sbjct: 361  TLINDRCKGVLCDRQSPSGVTVVNLENSEEAVAEENGGSISSQCYEGFPLQFEDFFVLSL 420

Query: 652  GTIDLRPSYHNAHQIWPVGYRSSWHDKITGSLFIFDISDGGDSGPVFTVRRCPCTIQSIP 831
            G ID RPSYH   +++PVG+RS WHDK+TGS+FI ++ DGGDSGP+F VRRCPC+   IP
Sbjct: 421  GEIDARPSYHEVTRVYPVGFRSCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIP 480

Query: 832  IGSTVLVREKLVSSNGEVNAGKDDSAAFSAIDEESVSIQMMLTESSPPLLEDEIS 996
            +GSTVL + K  S N  +   K+D    ++ D+   ++Q + ++  PP  +D +S
Sbjct: 481  VGSTVLSKGK--SENFSIEQQKEDGLINNSNDD---NLQTIFSDVCPPNEDDILS 530


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score =  169 bits (428), Expect = 1e-39
 Identities = 113/343 (32%), Positives = 176/343 (51%), Gaps = 38/343 (11%)
 Frame = +1

Query: 202  AIPTDHQHQTPNGIYLQGLREYIAERNGVLPDDWRVEFEFCNNRLKTFAIYISPDGSRFE 381
            ++P       P+ ++LQ LR +I+ER+GVL D WRVEF+   N  +  A+Y +P+G  F 
Sbjct: 239  SLPMRFPSLDPSELFLQNLRHFISERHGVLEDGWRVEFKQPLNGYQLCAVYCAPNGKTFS 298

Query: 382  SMSDVAQHLGLPTNFH------PLQTESA----EISMPHASHTSQGK-----ESSGATKA 516
            S+ DVA +LGL  N +       ++ ES+     + MP    TS+       E  G++ +
Sbjct: 299  SIQDVACYLGLAVNGNYSCMDADIRNESSLLQERLHMPKRRKTSRWPNNGFPEQKGSSVS 358

Query: 517  NNSRQ-------------RQNITRGXXXXXXXXXXXXXXXXRQEGFPVQFEDFFLISAGT 657
               R+             +                         G P+Q+EDFF++S G 
Sbjct: 359  AQLRRFPFNGQTMFPFVVKSGTHLQAGDSLNSGNNGCGCEEANNGLPMQYEDFFVLSLGR 418

Query: 658  IDLRPSYHNAHQIWPVGYRSSWHDKITGSLFIFDISDGGDSGPVFTVRRCPCTIQSIPIG 837
            ID+R SYHN + I+P+GY+S WHDKITGSLF  ++SD G SGPVF V R PC+   IP+G
Sbjct: 419  IDIRQSYHNVNVIYPIGYKSCWHDKITGSLFTCEVSD-GTSGPVFKVTRSPCSKSFIPVG 477

Query: 838  STVLVREKLVSSNGEVNAGKDDSAAFSAID-EESVSIQMMLTESSPPLLEDEISSTKMQ- 1011
            STV    K +    E N  K      S ++ ++  +I+ +L++ SPPL +D +S  + + 
Sbjct: 478  STVFSCPK-IDEMVEQNIDKQSDRRDSTLEHDDDANIETLLSDHSPPLGDDILSCLREKN 536

Query: 1012 -TEGLDSQKSNTSSSE-------SFSQKSGNHISNILGTKDSI 1116
             ++  +  +S   SS+       S++Q  G  I  I+  +DS+
Sbjct: 537  FSKTFNCLRSEVGSSQVESDKVLSYNQDRGVEIGEIVVEEDSL 579


Top