BLASTX nr result
ID: Cephaelis21_contig00043809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00043809
(361 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,... 147 9e-34
emb|CBI35295.3| unnamed protein product [Vitis vinifera] 139 2e-31
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 139 2e-31
ref|XP_003631155.1| Pentatricopeptide repeat-containing protein ... 134 6e-30
>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 557
Score = 147 bits (371), Expect = 9e-34
Identities = 65/119 (54%), Positives = 89/119 (74%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
+F +M+L G++PE ATM+G+LPAC+HLAAL+ G C H Y++++GFT++++ICNAL+DMY+
Sbjct: 414 MFHRMRLSGMDPELATMVGILPACAHLAALQHGSCCHSYALIKGFTSEITICNALIDMYA 473
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
KCGRID AR VFD+MHKRD+VSWNAMI F+ ML + PD VTF+
Sbjct: 474 KCGRIDTARNVFDRMHKRDIVSWNAMIIAYGNHGLGMEALLLFDNMLADGLEPDDVTFI 532
Score = 69.7 bits (169), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
++ KM G++P T +L ACS L A+ G+ H ++ +D+ + A+VDMY+
Sbjct: 105 LYYKMLELGIQPSKYTYPFVLKACSALQAIEEGKEIHIHAKRLDLDSDVYVSTAVVDMYA 164
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMI 261
KCG +D A +VF M RDVV+WN+MI
Sbjct: 165 KCGCLDDAEMVFSGMPYRDVVAWNSMI 191
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
+ +MQ V P S+T++ +LPA + AL G+ HG+ + RG+ D+ + L+DMY
Sbjct: 207 LLAQMQKDLVRPNSSTIVAVLPAVAQANALSHGKALHGFCVRRGYIDDVVVATGLLDMYG 266
Query: 181 KCGRIDVARIVFDKMH-KRDVVSWNAMI 261
KC I AR FD M R+ V+W+AM+
Sbjct: 267 KCQCIIYARNFFDMMSIVRNEVTWSAML 294
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 34 PESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYSKCGRIDVARIV 213
P T+ +L AC+ L + GRC H Y+I GF +DL + N L+ Y+KCG + A
Sbjct: 324 PTEVTLATVLRACAELTDVSRGRCIHCYTIKSGFISDLMLGNTLLSTYAKCGTVSDAIRY 383
Query: 214 FDKMHKRDVVSWNAMI 261
F +M +D VS++A+I
Sbjct: 384 FHEMELKDEVSYSAII 399
>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 139 bits (350), Expect = 2e-31
Identities = 65/119 (54%), Positives = 83/119 (69%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
IFR MQL G++P+ TM+G+LPACSHLAAL+ G C+HGY IVRGF TD ICNAL+DMYS
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 319
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
KCG+I AR VF++M + D+VSWNAMI F ++L + PD +TF+
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFI 378
Score = 72.0 bits (175), Expect = 5e-11
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
++ M GV P T +L ACS L A+ G H ++ + G +D+ +C ALVD Y+
Sbjct: 96 LYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYA 155
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMI 261
KCG + A+ +F M RDVV+WNAMI
Sbjct: 156 KCGILVEAQRLFSSMSHRDVVAWNAMI 182
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 139 bits (350), Expect = 2e-31
Identities = 65/119 (54%), Positives = 83/119 (69%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
IFR MQL G++P+ TM+G+LPACSHLAAL+ G C+HGY IVRGF TD ICNAL+DMYS
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
KCG+I AR VF++M + D+VSWNAMI F ++L + PD +TF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFI 518
Score = 72.4 bits (176), Expect = 4e-11
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
+ +MQ G+ P S+T++G+LP AL G+ HGY + R F + + L+DMY+
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYA 256
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQIL-PDRVT 351
KC + AR +FD M R+ VSW+AMI F++M+ K + P VT
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Score = 72.0 bits (175), Expect = 5e-11
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
++ M GV P T +L ACS L A+ G H ++ + G +D+ +C ALVD Y+
Sbjct: 96 LYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYA 155
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMI 261
KCG + A+ +F M RDVV+WNAMI
Sbjct: 156 KCGILVEAQRLFSSMSHRDVVAWNAMI 182
Score = 62.0 bits (149), Expect = 5e-08
Identities = 38/110 (34%), Positives = 54/110 (49%)
Frame = +1
Query: 28 VEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYSKCGRIDVAR 207
++P T+ +L AC+ L L GR H Y I G D+ + N L+ MY+KCG ID A
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 208 IVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
FD+M+ +D VS++A++ F M I PD T L
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 139 bits (350), Expect = 2e-31
Identities = 65/119 (54%), Positives = 83/119 (69%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
IFR MQL G++P+ TM+G+LPACSHLAAL+ G C+HGY IVRGF TD ICNAL+DMYS
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
KCG+I AR VF++M + D+VSWNAMI F ++L + PD +TF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFI 518
Score = 72.4 bits (176), Expect = 4e-11
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
+ +MQ G+ P S+T++G+LP AL G+ HGY + R F + + L+DMY+
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYA 256
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQIL-PDRVT 351
KC + AR +FD M R+ VSW+AMI F++M+ K + P VT
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Score = 72.0 bits (175), Expect = 5e-11
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
++ M GV P T +L ACS L A+ G H ++ + G +D+ +C ALVD Y+
Sbjct: 96 LYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYA 155
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMI 261
KCG + A+ +F M RDVV+WNAMI
Sbjct: 156 KCGILVEAQRLFSSMSHRDVVAWNAMI 182
Score = 61.6 bits (148), Expect = 6e-08
Identities = 38/110 (34%), Positives = 53/110 (48%)
Frame = +1
Query: 28 VEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYSKCGRIDVAR 207
++P T+ +L AC+ L L GR H Y I G D+ + N L+ MY+KCG ID A
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 208 IVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
FD M+ +D VS++A++ F M I PD T L
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
>ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 785
Score = 134 bits (338), Expect = 6e-30
Identities = 61/119 (51%), Positives = 80/119 (67%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
IFR+MQ G+ P TM+ LLPACSHLAAL+ G C HGY++VRGFT D SICNA++DMYS
Sbjct: 400 IFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYS 459
Query: 181 KCGRIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILPDRVTFL 357
KCG+I ++R +FD+M RD++SWN MI F+E+ + PD VT +
Sbjct: 460 KCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLI 518
Score = 68.9 bits (167), Expect = 4e-10
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 IFRKMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYS 180
++ M GV P + T LL ACS L AL+ GR H ++ + G + DL + AL+ MY+
Sbjct: 94 LYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA 153
Query: 181 KCGRIDVARIVFDKM--HKRDVVSWNAMI 261
KCG + A+ +F+ + RD+V+WNAMI
Sbjct: 154 KCGHLYQAQTLFNSISHQDRDIVAWNAMI 182
Score = 65.9 bits (159), Expect = 3e-09
Identities = 34/104 (32%), Positives = 56/104 (53%)
Frame = +1
Query: 10 KMQLFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYSKCG 189
+MQ GV P S+T++ +LP AL G+ H Y I F ++ + AL+DMY+KC
Sbjct: 200 QMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCH 259
Query: 190 RIDVARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEML 321
+ AR +F+ ++K++ V W+AMI +++ML
Sbjct: 260 LLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +1
Query: 19 LFGVEPESATMMGLLPACSHLAALRPGRCAHGYSIVRGFTTDLSICNALVDMYSKCGRID 198
++G+ P AT+ +L AC+ L L+ G+ H + I G D ++ N+L+ MY+KCG +D
Sbjct: 305 IYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMD 364
Query: 199 VARIVFDKMHKRDVVSWNAMIXXXXXXXXXXXXXXXFEEMLGKQILP 339
A D+M +D VS++A+I F +M I P
Sbjct: 365 NAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAP 411