BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043797
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    66   8e-16
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   1e-12
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    63   4e-12
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    63   9e-12
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    55   9e-12

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 65.9 bits (159), Expect(3) = 8e-16
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = -3

Query: 277 LASRVISDNVLLAQEIPQHIDKRVFGHNVTFKLDLLKAFDRVSWHFLEKLLFQFGFPQQF 98
           +  R IS  V+LA E    ++KR +G NV  K+D+ KAFD + W+FL  +L +FGF ++F
Sbjct: 555 IRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEKF 614

Query: 97  IRLIMNNLVANWVSFLINGSITCFF 23
           +  I+  L +  +S L+NG    FF
Sbjct: 615 VHWILVILQSARLSVLVNGKAVGFF 639



 Score = 36.6 bits (83), Expect(3) = 8e-16
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = -1

Query: 477 FFVGVPVLCGIASTVLVLLPKVPSPKNFGEF*PNSLCNFINKVYTHIXXXXXXXXXXXLI 298
           FF+   +   I S ++VL+PKVP  +  G++ P +L NF  K+ + I           +I
Sbjct: 488 FFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRII 547

Query: 297 SAKQ 286
           S +Q
Sbjct: 548 SVEQ 551



 Score = 25.8 bits (55), Expect(3) = 8e-16
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 533 FYYACWDILGGNLN*SMLDFLLGSQ 459
           FY   WDI+G ++  S+ DF +  Q
Sbjct: 469 FYQTYWDIVGADVIQSVQDFFISGQ 493


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 58.9 bits (141), Expect(2) = 1e-12
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = -3

Query: 277 LASRVISDNVLLAQEIPQHI--DKRVFGHNVTFKLDLLKAFDRVSWHFLEKLLFQFGFPQ 104
           L  R  +DN ++ QEI   +   KR  G+ V FKLDL KAFD V+W FL   L  FGFP 
Sbjct: 544 LPGRGTADNSIILQEILHFMKRSKRKKGY-VAFKLDLEKAFDNVNWDFLNSCLLDFGFPD 602

Query: 103 QFIRLIMNNLVANWVSFLINGS 38
             ++LIM+ + +   S L NG+
Sbjct: 603 IIVKLIMHCVSSANYSLLWNGN 624



 Score = 38.9 bits (89), Expect(2) = 1e-12
 Identities = 15/37 (40%), Positives = 26/37 (70%)
 Frame = -1

Query: 447 IASTVLVLLPKVPSPKNFGEF*PNSLCNFINKVYTHI 337
           I++T++ L+PK+ SP  + +F P SLCN + K+ T +
Sbjct: 487 ISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKV 523


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 62.8 bits (151), Expect(2) = 4e-12
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -3

Query: 268 RVISDNVLLAQEIPQHID--KRVFGHNVTFKLDLLKAFDRVSWHFLEKLLFQFGFPQQFI 95
           R+I+DNVLLA EI  H+   K+  G     KLD+ KA+DRV W FLE ++ + GF ++++
Sbjct: 125 RLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWV 184

Query: 94  RLIMNNLVANWVSFLINGSIT 32
           +LIM  +        +N S T
Sbjct: 185 QLIMKCVTTVTYKIKVNDSYT 205



 Score = 33.1 bits (74), Expect(2) = 4e-12
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -1

Query: 468 GVPVLCGIASTVLVLLPKVPSPKNFGEF*PNSLCNFINKVYTHI 337
           G P+  G   T++VL+PK  +P+   +  P SLCN + K+ + +
Sbjct: 58  GGPIPEGWNDTIIVLIPKTNTPQMLKDLRPISLCNVLYKLISKV 101


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 62.8 bits (151), Expect(2) = 9e-12
 Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = -3

Query: 277  LASRVISDNVLLAQEIPQHIDKRVFGHNVTF--KLDLLKAFDRVSWHFLEKLLFQFGFPQ 104
            +++R I DNV++A EI  H+      +N  F  KLD+ KA+DRV W+FLE +L + GF  
Sbjct: 1150 VSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMGFVD 1209

Query: 103  QFIRLIMNNLVANWVSFLING 41
             +I L+M+ +  + +S LING
Sbjct: 1210 SWIGLVMSCVTTSSLSVLING 1230



 Score = 32.0 bits (71), Expect(2) = 9e-12
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 438  TVLVLLPKVPSPKNFGEF*PNSLCNFINKVYTHI 337
            T L L+PKV +P +   + P +LCNF  K+ T I
Sbjct: 1096 THLALIPKVKAPTHPSHYRPIALCNFSYKILTKI 1129


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 55.5 bits (132), Expect(2) = 9e-12
 Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = -3

Query: 268 RVISDNVLLAQEIPQHIDKRVFGHN--VTFKLDLLKAFDRVSWHFLEKLLFQFGFPQQFI 95
           R+ISDN+L+A E+  ++  +  G       KLD+ KA+DRV W FL  ++   GF  ++I
Sbjct: 238 RLISDNILVAYEMTHYMRSKKRGKMGYAAIKLDMSKAYDRVEWSFLRDMMLWLGFNAEWI 297

Query: 94  RLIMNNLVANWVSFLINGSITCFFN 20
            L+M+ + +      +NG ++  F+
Sbjct: 298 NLVMHCVTSVSYKIKVNGDLSEVFS 322



 Score = 39.3 bits (90), Expect(2) = 9e-12
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 468 GVPVLCGIASTVLVLLPKVPSPKNFGEF*PNSLCNFINKVYTHI 337
           G P+      T++VL+PKVP P+N  +  P SLCN + K+ + +
Sbjct: 171 GAPMPPEWNETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKV 214