BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043629
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE93444.1| ATP synthase CF0 subunit IV [Xiphidium caeruleum]       57   3e-13
ref|YP_001718697.1| ATP synthase CF0 subunit IV [Trachelium caer...    53   3e-13
ref|YP_817470.1| ATP synthase CF0 subunit IV [Coffea arabica] gi...    53   3e-13
gb|ACH47677.1| ATP synthase CF0 subunit IV [Sarcocaulon vanderie...    54   4e-13
ref|YP_003934340.1| ATP synthase CF0 subunit IV [Monsonia specio...    54   5e-13

>gb|AGE93444.1| ATP synthase CF0 subunit IV [Xiphidium caeruleum]
          Length = 247

 Score = 57.0 bits (136), Expect(2) = 3e-13
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -1

Query: 175 SKTQIGEQYGPWVPFIGTPFLLIFVCN 95
           SKTQIGE+YGPWVPFIGT FL IFVCN
Sbjct: 83  SKTQIGEEYGPWVPFIGTMFLFIFVCN 109



 Score = 42.7 bits (99), Expect(2) = 3e-13
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = -2

Query: 243 DPQTTPTGVQNFFKYVLEFIRDIVKLKL 160
           +PQT PT  QNFF+YVLEFIRD+ K ++
Sbjct: 60  NPQTVPTNGQNFFEYVLEFIRDLSKTQI 87


>ref|YP_001718697.1| ATP synthase CF0 subunit IV [Trachelium caeruleum]
           gi|223635060|sp|A9QC93.1|ATPI_TRACE RecName: Full=ATP
           synthase subunit a, chloroplastic; AltName: Full=ATP
           synthase F0 sector subunit a; AltName: Full=F-ATPase
           subunit IV gi|156598867|gb|ABU85686.1| ATP synthase CF0
           subunit IV [Trachelium caeruleum]
           gi|157267529|gb|ABV26522.1| ATP synthase CF0 subunit IV
           (chloroplast) [Trachelium caeruleum]
          Length = 247

 Score = 52.8 bits (125), Expect(2) = 3e-13
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -1

Query: 175 SKTQIGEQYGPWVPFIGTPFLLIFVCN 95
           SKTQIGE+YGPWVPFIGT FL IFV N
Sbjct: 83  SKTQIGEEYGPWVPFIGTIFLFIFVSN 109



 Score = 47.0 bits (110), Expect(2) = 3e-13
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -2

Query: 240 PQTTPTGVQNFFKYVLEFIRDIVKLKL 160
           PQT PTG+QNFF+YVLEFIRD+ K ++
Sbjct: 61  PQTIPTGIQNFFEYVLEFIRDVSKTQI 87


>ref|YP_817470.1| ATP synthase CF0 subunit IV [Coffea arabica]
           gi|122153609|sp|A0A323.1|ATPI_COFAR RecName: Full=ATP
           synthase subunit a, chloroplastic; AltName: Full=ATP
           synthase F0 sector subunit a; AltName: Full=F-ATPase
           subunit IV gi|116242152|gb|ABJ89667.1| ATP synthase CF0
           subunit IV [Coffea arabica]
          Length = 244

 Score = 52.8 bits (125), Expect(2) = 3e-13
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -1

Query: 175 SKTQIGEQYGPWVPFIGTPFLLIFVCN 95
           SKTQIGE+YGPWVPFIGT FL IFV N
Sbjct: 80  SKTQIGEEYGPWVPFIGTLFLFIFVSN 106



 Score = 47.0 bits (110), Expect(2) = 3e-13
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 243 DPQTTPTGVQNFFKYVLEFIRDIVKLKL 160
           DPQT PTG QNFF+YVLEFIRD+ K ++
Sbjct: 57  DPQTIPTGGQNFFEYVLEFIRDVSKTQI 84


>gb|ACH47677.1| ATP synthase CF0 subunit IV [Sarcocaulon vanderietiae]
          Length = 248

 Score = 53.9 bits (128), Expect(2) = 4e-13
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = -1

Query: 175 SKTQIGEQYGPWVPFIGTPFLLIFVCNLERSTF 77
           SKTQIGE+YGPWVPFIGT FL IFV N   + F
Sbjct: 84  SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALF 116



 Score = 45.4 bits (106), Expect(2) = 4e-13
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 243 DPQTTPTGVQNFFKYVLEFIRDIVKLKL 160
           +PQT PT VQNFF+YVLEFIRD+ K ++
Sbjct: 61  NPQTVPTDVQNFFEYVLEFIRDVSKTQI 88


>ref|YP_003934340.1| ATP synthase CF0 subunit IV [Monsonia speciosa]
           gi|197132316|gb|ACH47676.1| ATP synthase CF0 subunit IV
           [Monsonia speciosa] gi|300069355|gb|ADJ66475.1| ATP
           synthase CF0 subunit IV [Monsonia speciosa]
          Length = 248

 Score = 53.9 bits (128), Expect(2) = 5e-13
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = -1

Query: 175 SKTQIGEQYGPWVPFIGTPFLLIFVCNLERSTF 77
           SKTQIGE+YGPWVPFIGT FL IFV N   + F
Sbjct: 84  SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALF 116



 Score = 45.1 bits (105), Expect(2) = 5e-13
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 243 DPQTTPTGVQNFFKYVLEFIRDIVKLKL 160
           +PQT PT VQNFF+YVLEFIRD+ K ++
Sbjct: 61  NPQTIPTDVQNFFEYVLEFIRDVSKTQI 88