BLASTX nr result

ID: Cephaelis21_contig00043592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043592
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi...   230   2e-58
gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...   227   2e-57
gb|AFP49313.1| 40S ribosomal protein S17, partial [Olea europaea]     226   3e-57
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]            222   4e-56
gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK255...   214   1e-53

>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
           gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
           ribosomal protein S17
           gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
           protein S17 [Solanum lycopersicum]
          Length = 144

 Score =  230 bits (586), Expect = 2e-58
 Identities = 115/133 (86%), Positives = 127/133 (95%)
 Frame = -1

Query: 575 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIIPSKRLQNKIAGFSTHLMKR 396
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKK+LEEVAIIPSKRL+NKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 395 IQKGPVRGISLKLQEEERERRMDFVPEVSAIKTDIIEVDKETIDMLAAISISDLPVVVKQ 216
           IQKGPVRGISLKLQEEERERRMDFVP+ SAIKTD+IEVDKET+DML+A+ +SDLP VVKQ
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQ 120

Query: 215 AVEPQSLSIAPAY 177
           A EPQ+++  P+Y
Sbjct: 121 AAEPQAVAALPSY 133


>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score =  227 bits (578), Expect = 2e-57
 Identities = 113/133 (84%), Positives = 126/133 (94%)
 Frame = -1

Query: 575 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIIPSKRLQNKIAGFSTHLMKR 396
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKK+LEEVAIIPSKRL+NKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 395 IQKGPVRGISLKLQEEERERRMDFVPEVSAIKTDIIEVDKETIDMLAAISISDLPVVVKQ 216
           IQKGPVRGISLKLQEEERERRMDFVP+ SAIKTD+IEVDKET+DML+++ +SDLP VVKQ
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSSLGMSDLPGVVKQ 120

Query: 215 AVEPQSLSIAPAY 177
           A EPQ+++  P +
Sbjct: 121 AAEPQAVAALPTF 133


>gb|AFP49313.1| 40S ribosomal protein S17, partial [Olea europaea]
          Length = 134

 Score =  226 bits (576), Expect = 3e-57
 Identities = 114/133 (85%), Positives = 124/133 (93%)
 Frame = -1

Query: 575 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIIPSKRLQNKIAGFSTHLMKR 396
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKK+LEEVAIIPSKRL+NKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 395 IQKGPVRGISLKLQEEERERRMDFVPEVSAIKTDIIEVDKETIDMLAAISISDLPVVVKQ 216
           IQKGPVRGISLKLQEEERERRMDFVP+ SAIKTD+IEV +ET DML A+ ++DLP V+KQ
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIEVGQETHDMLTALGMADLPGVIKQ 120

Query: 215 AVEPQSLSIAPAY 177
            +EPQSL  APAY
Sbjct: 121 TIEPQSLPTAPAY 133


>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
          Length = 145

 Score =  222 bits (566), Expect = 4e-56
 Identities = 111/128 (86%), Positives = 124/128 (96%)
 Frame = -1

Query: 575 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIIPSKRLQNKIAGFSTHLMKR 396
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKK+LEEVAIIPSKRL+NKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 395 IQKGPVRGISLKLQEEERERRMDFVPEVSAIKTDIIEVDKETIDMLAAISISDLPVVVKQ 216
           IQKGPVRGISLKLQEEERERRMDFVP+ SAIKTD+IEVDKET+DML+A+ +++LP VVKQ
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMAELPGVVKQ 120

Query: 215 AVEPQSLS 192
           A EPQ+++
Sbjct: 121 AAEPQAVA 128


>gb|ABK21036.1| unknown [Picea sitchensis] gi|116790181|gb|ABK25531.1| unknown
           [Picea sitchensis] gi|116793494|gb|ABK26768.1| unknown
           [Picea sitchensis] gi|148905787|gb|ABR16057.1| unknown
           [Picea sitchensis] gi|224285099|gb|ACN40277.1| unknown
           [Picea sitchensis]
          Length = 146

 Score =  214 bits (545), Expect = 1e-53
 Identities = 107/124 (86%), Positives = 119/124 (95%)
 Frame = -1

Query: 575 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKLLEEVAIIPSKRLQNKIAGFSTHLMKR 396
           MGRVRTKTVKKSSRQ+IERYYS+MTLDFHTNKK++EEVAIIPSKRL+NKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQIIERYYSRMTLDFHTNKKIVEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 395 IQKGPVRGISLKLQEEERERRMDFVPEVSAIKTDIIEVDKETIDMLAAISISDLPVVVKQ 216
           IQ+GPVRGISLKLQEEERERRMDFVPE SAIKT++IEVDKET+DMLA++ +SDLP VVKQ
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEESAIKTEVIEVDKETMDMLASLGMSDLPGVVKQ 120

Query: 215 AVEP 204
           A  P
Sbjct: 121 ADPP 124