BLASTX nr result

ID: Cephaelis21_contig00043558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043558
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              96   4e-18
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    91   1e-16
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]         91   1e-16
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    83   2e-14
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    83   3e-14

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/87 (49%), Positives = 55/87 (63%)
 Frame = -2

Query: 280 YVLGTFRIPSTIARKIDRSLAHFIWQGDVEGRGIHWSSWDNLCKSKLFGGLGMRSTSQLN 101
           YV+  FR+P TI  K+  ++A F W  D E RG+HW +W+ LC SK  GGLG RS +  N
Sbjct: 653 YVMSCFRLPKTITSKLTSAVAKFWWSSDGESRGMHWMAWNKLCSSKADGGLGFRSVNDFN 712

Query: 100 QAFLAKIAWKLHSDKSSLFARFFLGRY 20
            A LAK  W+L +   SLFA+ F GRY
Sbjct: 713 SALLAKQLWRLITVPDSLFAKVFKGRY 739


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = -2

Query: 280 YVLGTFRIPSTIARKIDRSLAHFIWQGDVEGRGIHWSSWDNLCKSKLFGGLGMRSTSQLN 101
           YV+  FR+P  I  K+  ++A F W  + + RG+HW +WD LC SK  GGLG R+    N
Sbjct: 587 YVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFN 646

Query: 100 QAFLAKIAWKLHSDKSSLFARFFLGRY 20
            A LAK  W+L +   SLFA+ F GRY
Sbjct: 647 SALLAKQLWRLITAPDSLFAKVFKGRY 673


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/87 (47%), Positives = 53/87 (60%)
 Frame = -2

Query: 280 YVLGTFRIPSTIARKIDRSLAHFIWQGDVEGRGIHWSSWDNLCKSKLFGGLGMRSTSQLN 101
           YV+  F +P TI  K+  ++  F W  + E RG+HW +WD +C SK  GGLG RS    N
Sbjct: 57  YVMSCFTLPKTITSKLTSAIPKFWWSSNGESRGMHWMAWDKVCYSKSEGGLGFRSVDNFN 116

Query: 100 QAFLAKIAWKLHSDKSSLFARFFLGRY 20
            A LAK  W+L +  +SLFAR F GRY
Sbjct: 117 SALLAKQLWRLITVPNSLFARVFKGRY 143


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/87 (43%), Positives = 49/87 (56%)
 Frame = -2

Query: 280 YVLGTFRIPSTIARKIDRSLAHFIWQGDVEGRGIHWSSWDNLCKSKLFGGLGMRSTSQLN 101
           Y++  FR+P  +  +I+  + +F W    E R IHW+SW  LCKSKL GG+G R     N
Sbjct: 52  YIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFN 111

Query: 100 QAFLAKIAWKLHSDKSSLFARFFLGRY 20
            A LAK  W+L     SL AR F  RY
Sbjct: 112 SALLAKQCWRLXQRPQSLVARVFKARY 138


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/87 (43%), Positives = 49/87 (56%)
 Frame = -2

Query: 280 YVLGTFRIPSTIARKIDRSLAHFIWQGDVEGRGIHWSSWDNLCKSKLFGGLGMRSTSQLN 101
           Y++  FR+P  +  +I+  + +F W    E R IHW+SW  LCKSKL GG+G R     N
Sbjct: 52  YIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFN 111

Query: 100 QAFLAKIAWKLHSDKSSLFARFFLGRY 20
            A LAK  W+L     SL AR F  RY
Sbjct: 112 SALLAKQCWRLVQRPQSLVARVFKARY 138


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