BLASTX nr result
ID: Cephaelis21_contig00042934
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00042934
(395 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,... 155 3e-36
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 147 7e-34
emb|CBI25349.3| unnamed protein product [Vitis vinifera] 147 7e-34
ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30
ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab... 124 6e-27
>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 833
Score = 155 bits (392), Expect = 3e-36
Identities = 71/131 (54%), Positives = 100/131 (76%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
KEALD F+ ME+D VKPD+D++A++I+ACTG+E ++LG IHG VIK G+Q D ++ ++L
Sbjct: 425 KEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSL 484
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
++ YSK G ++FSD+ KNLV WNS+ISCYC+N L D+SI+L Q++++ LYPDS
Sbjct: 485 LDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDS 544
Query: 34 VSVTVALLAIS 2
VS T L AIS
Sbjct: 545 VSFTSVLAAIS 555
Score = 67.4 bits (163), Expect = 1e-09
Identities = 34/120 (28%), Positives = 63/120 (52%)
Frame = -2
Query: 388 ALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALME 209
+++LF + + + PD+ +V+ A + + + G +HG +++ + FD + L++
Sbjct: 528 SINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLID 587
Query: 208 FYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSVS 29
Y KCG L + +F I KNLV WNS+I Y + +I L ++ G+ PD V+
Sbjct: 588 MYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVT 647
Score = 61.2 bits (147), Expect = 8e-08
Identities = 34/131 (25%), Positives = 67/131 (51%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
+ +L+ + + +++ VK + ++AC E + G +H IK G + D Y+ T+L
Sbjct: 223 ENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSL 282
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
+ Y KC + S + VF+++ K + +WN+LIS Y N ++ + Q+ + DS
Sbjct: 283 LTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDS 342
Query: 34 VSVTVALLAIS 2
++ L + S
Sbjct: 343 FTILNVLTSSS 353
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/119 (28%), Positives = 61/119 (51%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
+AL ++K M+ V D+ + V+ + + +LG IH ++KR +Q + +AL+
Sbjct: 325 DALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALL 384
Query: 211 EFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
YSK G N +FS + +++V W S+IS +CQN ++ + + PDS
Sbjct: 385 TMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDS 443
>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 147 bits (372), Expect = 7e-34
Identities = 71/131 (54%), Positives = 98/131 (74%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
K+ALDLF+ ME + VK D+DV+ +VI+A G+EN+ELG IHG IKRG++ D ++ +L
Sbjct: 428 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 487
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
++ YSK G S + VFS + +KNLV WNS+ISCY N L ++SI+LLPQI+QHG Y DS
Sbjct: 488 VDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDS 547
Query: 34 VSVTVALLAIS 2
VS+T L+A+S
Sbjct: 548 VSITTVLVAVS 558
Score = 70.5 bits (171), Expect = 1e-10
Identities = 35/128 (27%), Positives = 69/128 (53%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
+AL L+ M++ D+ ++++++ C+ + + + G +H VIKR MQ + + +AL+
Sbjct: 328 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALL 387
Query: 211 EFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSV 32
Y KCG VF + +++V W S+I+ +CQN ++ L + + G+ DS
Sbjct: 388 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 447
Query: 31 SVTVALLA 8
+T + A
Sbjct: 448 VMTSVISA 455
>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 147 bits (372), Expect = 7e-34
Identities = 71/131 (54%), Positives = 98/131 (74%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
K+ALDLF+ ME + VK D+DV+ +VI+A G+EN+ELG IHG IKRG++ D ++ +L
Sbjct: 833 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
++ YSK G S + VFS + +KNLV WNS+ISCY N L ++SI+LLPQI+QHG Y DS
Sbjct: 893 VDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDS 952
Query: 34 VSVTVALLAIS 2
VS+T L+A+S
Sbjct: 953 VSITTVLVAVS 963
Score = 70.5 bits (171), Expect = 1e-10
Identities = 35/128 (27%), Positives = 69/128 (53%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
+AL L+ M++ D+ ++++++ C+ + + + G +H VIKR MQ + + +AL+
Sbjct: 733 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALL 792
Query: 211 EFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSV 32
Y KCG VF + +++V W S+I+ +CQN ++ L + + G+ DS
Sbjct: 793 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 852
Query: 31 SVTVALLA 8
+T + A
Sbjct: 853 VMTSVISA 860
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
+AL+L + +++ C + N+ G IH ++ G+Q D Y+ T+L+
Sbjct: 424 QALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLI 483
Query: 211 EFYSKCGRLNSVKDVFSDILHK-----NLVVWNSLISCYCQNELTDVSISLLPQIMQHGL 47
Y KCG L S VF + ++ VWN +I Y + + ++ ++ + G+
Sbjct: 484 NMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGI 543
Query: 46 YPDSVSVTVAL 14
PD S+++ L
Sbjct: 544 RPDGYSLSIVL 554
Score = 56.6 bits (135), Expect = 2e-06
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
+E L F M+ ++PD ++ V+ C + G IHG +I+ + D Y+ TAL
Sbjct: 529 EEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETAL 588
Query: 214 MEFYSKCGRLNSVKDVFSDILHK-NLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPD 38
+ YS C R +F + ++ N+V WN +I + +N + + S+ L
Sbjct: 589 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 648
Query: 37 SVSVTVALLAIS 2
S S T A A S
Sbjct: 649 SASFTGAFTACS 660
>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
predicted protein [Populus trichocarpa]
Length = 848
Score = 135 bits (340), Expect = 3e-30
Identities = 63/130 (48%), Positives = 95/130 (73%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
EAL+ + M KPD+D++A+V++ACTG++N+ LG IHG+ IK G++ D ++ ++L+
Sbjct: 441 EALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLV 500
Query: 211 EFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSV 32
+ YSK +VFSD+ KNLV WNS+ISCYC+N L D+SISL Q+ Q+GL+PDSV
Sbjct: 501 DMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSV 560
Query: 31 SVTVALLAIS 2
S+T L+++S
Sbjct: 561 SITSVLVSVS 570
Score = 70.9 bits (172), Expect = 1e-10
Identities = 34/119 (28%), Positives = 65/119 (54%)
Frame = -2
Query: 391 EALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALM 212
+ L ++K M+ + PD+ V+++C + + + G IH ++KR +Q + + +AL+
Sbjct: 340 DGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALL 399
Query: 211 EFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
YSKCG + +F+ I +++V W S+IS +CQN ++ + +G PDS
Sbjct: 400 TMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDS 458
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/127 (25%), Positives = 68/127 (53%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
+ +L+++ + +++ VK + + ++AC E + G +H ++K G + D Y+ T+L
Sbjct: 238 ENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL 297
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
+ YSKC + ++VF + K +WN++IS Y N + + + Q+ + PDS
Sbjct: 298 LTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDS 357
Query: 34 VSVTVAL 14
++ T L
Sbjct: 358 LTATNVL 364
Score = 61.2 bits (147), Expect = 8e-08
Identities = 31/120 (25%), Positives = 64/120 (53%)
Frame = -2
Query: 388 ALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALME 209
++ LF M + PD+ + +V+ + + + + G +HG +I++ + D + AL++
Sbjct: 543 SISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALID 602
Query: 208 FYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSVS 29
Y KCG L + +F ++L NLV WN +I+ + ++SL ++ G+ PD ++
Sbjct: 603 MYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDIT 662
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = -2
Query: 325 AVINACTGIENMELGFCIHGIVIKRGMQF-DAYMGTALMEFYSKCGRLNSVKDVF----- 164
+++ AC + N++ G IH +I +G + D Y+ T+L+ FY KCG + VF
Sbjct: 54 SLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPE 113
Query: 163 SDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSVSVTVAL 14
S++ +++ WNS+++ Y + I+ ++ G+ PD+ S+ + L
Sbjct: 114 SEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILL 163
>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
Length = 1359
Score = 124 bits (312), Expect = 6e-27
Identities = 58/133 (43%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Frame = -2
Query: 394 KEALDLFKVM--ESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGT 221
KEAL +F M + D +KPD+D++ +VINAC G+E + G +HG +IK G + ++G+
Sbjct: 955 KEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGS 1014
Query: 220 ALMEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYP 41
+L++ YSKCG VF+ + +N+V WNS+ISCY +N L ++SI L ++ G++P
Sbjct: 1015 SLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFP 1074
Query: 40 DSVSVTVALLAIS 2
DSVS+T L+AIS
Sbjct: 1075 DSVSITSVLVAIS 1087
Score = 80.5 bits (197), Expect = 1e-13
Identities = 38/124 (30%), Positives = 71/124 (57%)
Frame = -2
Query: 394 KEALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTAL 215
+ +L+L+ + +S+ VK + + AC+ EN G IH V+K G+ D Y+ T+L
Sbjct: 753 ESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSL 812
Query: 214 MEFYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDS 35
+ YSKCG + + VFS ++ K L +WN++++ Y +N+ ++ L + Q + PDS
Sbjct: 813 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDS 872
Query: 34 VSVT 23
+++
Sbjct: 873 FTLS 876
Score = 69.3 bits (168), Expect = 3e-10
Identities = 33/120 (27%), Positives = 67/120 (55%)
Frame = -2
Query: 388 ALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALME 209
+++LF +M S + PD+ + +V+ A + ++ G +HG ++ G+ D ++ AL++
Sbjct: 1060 SIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 1119
Query: 208 FYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSVS 29
Y KCG +++F + HK+L+ WN +I Y + ++SL ++ + G PD V+
Sbjct: 1120 MYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVT 1179
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/96 (35%), Positives = 51/96 (53%)
Frame = -2
Query: 388 ALDLFKVMESDCVKPDTDVVAAVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALME 209
AL+LF M V PD+ ++ VI+ C+ + G +H + KR +Q + +AL+
Sbjct: 856 ALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLT 915
Query: 208 FYSKCGRLNSVKDVFSDILHKNLVVWNSLISCYCQN 101
YSKCG VF + K++V W SLIS C+N
Sbjct: 916 LYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKN 951
Score = 57.0 bits (136), Expect = 2e-06
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = -2
Query: 325 AVINACTGIENMELGFCIHGIVIKRGMQFDAYMGTALMEFYSKCGRLNSVKDVF-----S 161
+++ AC+ + N+ G IHG +I G ++D ++ T+L+ Y KCG L+ VF S
Sbjct: 566 SLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 625
Query: 160 DILHKNLVVWNSLISCYCQNELTDVSISLLPQIMQHGLYPDSVSVTVAL 14
+ +++ V NS+I Y + + +++ G+ PD+ S+++ +
Sbjct: 626 GVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVV 674