BLASTX nr result

ID: Cephaelis21_contig00042933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042933
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   141   9e-32
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   135   5e-30
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,...   127   1e-27

>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  141 bits (355), Expect = 9e-32
 Identities = 66/110 (60%), Positives = 87/110 (79%)
 Frame = -1

Query: 332 LSSLSFLRRIPKRVSLNASFSSISCANAVNIDPETDQNPPNSSDFESKIQFLRNKLHPES 153
           LS  +FL+RIPK V+L A  SS+SC N + I+PE +QN PN  DF+ KIQ LRNKL+P++
Sbjct: 2   LSPSTFLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDN 61

Query: 152 MVHVLDSTTDVNSSLKLFKWASIQRKFKHNVDTYYLMILKLGMAGCVEEV 3
           ++ VL ST+DVNS++K+FKWA++QRKF H  DTYY +I KLGMAG VEE+
Sbjct: 62  LIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEM 111


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  137 bits (344), Expect = 2e-30
 Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 2/116 (1%)
 Frame = -1

Query: 344 MAVKLSSLSFLRRIPKRVSLNASFSSISCANAVNIDPETDQN--PPNSSDFESKIQFLRN 171
           MAVKLSSL+   RIPK V L AS SSISCAN +   PE DQ   PPN ++FE K QFLRN
Sbjct: 1   MAVKLSSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 170 KLHPESMVHVLDSTTDVNSSLKLFKWASIQRKFKHNVDTYYLMILKLGMAGCVEEV 3
           +L P+ ++ VLD+T D+NS++K+FKWAS Q++F+H  DTY+ +ILKLGM G +E++
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDM 116


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  135 bits (340), Expect = 5e-30
 Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 2/116 (1%)
 Frame = -1

Query: 344 MAVKLSSLSFLRRIPKRVSLNASFSSISCANAVNIDPETDQN--PPNSSDFESKIQFLRN 171
           MAVKLSSL+  RRIPK V L AS SSIS AN +   PE DQ   PPN ++FE K QFLRN
Sbjct: 1   MAVKLSSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRN 60

Query: 170 KLHPESMVHVLDSTTDVNSSLKLFKWASIQRKFKHNVDTYYLMILKLGMAGCVEEV 3
           +L P+ ++ VLD+T D+NS++K+FKWAS Q++F+H  DTY+ +ILKLGM G +E++
Sbjct: 61  RLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDM 116


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  128 bits (322), Expect = 6e-28
 Identities = 61/110 (55%), Positives = 84/110 (76%)
 Frame = -1

Query: 332 LSSLSFLRRIPKRVSLNASFSSISCANAVNIDPETDQNPPNSSDFESKIQFLRNKLHPES 153
           LS  +  + IPK ++L +  SS+SC NA+ I+PE +QN PN +DF++KIQ LRNKL P+ 
Sbjct: 2   LSPSTLSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDY 61

Query: 152 MVHVLDSTTDVNSSLKLFKWASIQRKFKHNVDTYYLMILKLGMAGCVEEV 3
           ++ VL ST+D+NS++KLFKWAS+QR+F H  DTYY +I KLGMA  VEE+
Sbjct: 62  LIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEM 111


>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 739

 Score =  127 bits (320), Expect = 1e-27
 Identities = 57/119 (47%), Positives = 92/119 (77%)
 Frame = -1

Query: 359 SDET*MAVKLSSLSFLRRIPKRVSLNASFSSISCANAVNIDPETDQNPPNSSDFESKIQF 180
           S  T +   LS L+  +RI + V+LN++  S+SC +++ I+PE DQ+  N++DF++KI  
Sbjct: 7   SKNTALTAMLSPLTLSKRISRWVNLNSALFSVSCTSSIQINPEIDQSILNTTDFDAKIHI 66

Query: 179 LRNKLHPESMVHVLDSTTDVNSSLKLFKWASIQRKFKHNVDTYYLMILKLGMAGCVEEV 3
           LRNKL+P+S++ VL ST+D+NS++K+FKWAS+Q++F H  DTY+ +ILKLG+AG ++E+
Sbjct: 67  LRNKLYPDSLIKVLQSTSDINSAVKIFKWASLQKRFNHTSDTYFWIILKLGLAGNLKEM 125


Top