BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042800
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   108   3e-22
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...    75   7e-12

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/97 (55%), Positives = 66/97 (68%)
 Frame = -3

Query: 291 RALVLSGRRLMPVGLPEDHSTDPFASPLPRGPVPARRVVHVEPFTWDNMSYGQCSRTLAL 112
           R L  SGRRL   GLP    +DPFASP P  P    +V HV+P +W+ MS+GQCSR L L
Sbjct: 173 RTLAFSGRRLSVSGLPS--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALTL 230

Query: 111 YKQLTSCFGSKMFQATLYKEAVKKVCKLTDAVPVSIP 1
           YKQL SCFG KMF ++LY  AV+KV +L +  PV+IP
Sbjct: 231 YKQLCSCFGVKMFSSSLYGMAVRKVLRLREDFPVAIP 267


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 291 RALVLSGRRLMPVGLPEDHSTDPFASPLPR-GPVPARRVVHVEPFTWDNMSYGQCSRTLA 115
           RA   SG+RL   GLPE     P  S L R       +  HV+P +W+ MS+GQCSR L 
Sbjct: 173 RAFAFSGKRLSVSGLPEG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRALT 228

Query: 114 LYKQLTSCFGSKMFQATLYKEAVKKVCKL 28
           LY+QL  CFG KMF ++LY  AV++   L
Sbjct: 229 LYRQLCGCFGMKMFSSSLYGMAVRRFSAL 257