BLASTX nr result

ID: Cephaelis21_contig00042664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042664
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               56   8e-06
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    56   8e-06

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 43/141 (30%), Positives = 58/141 (41%)
 Frame = +3

Query: 180  KVVMWIEPNFPAFKINCDGSGLFFSXXXXXXXXXXD*YGDCILASSIFFELGISFGVEVF 359
            K+V W  PN    KIN DGS  F S          D     I+A SI      +   E  
Sbjct: 743  KIVHWNTPNINCVKINTDGS--FSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEAL 800

Query: 360  ALTHVLYLCLEKRIQNVHFELDYKRLVNMIMGASAFPWRFYSELSCIRSTILAHKYVLRH 539
            A    +  CL++   N + ELD K +V+M+    A   +    +  I   +      + H
Sbjct: 801  AARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNH 860

Query: 540  VYREPNFVADNLEN*AAYSND 602
             YRE N VAD L   A  SN+
Sbjct: 861  CYREANQVADALAKHAVISNE 881


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 36/130 (27%), Positives = 58/130 (44%)
 Frame = +3

Query: 186  VMWIEPNFPAFKINCDGSGLFFSXXXXXXXXXXD*YGDCILASSIFFELGISFGVEVFAL 365
            V WI+P     K+N DGS +  +          +  G  I+A +I    G S   E  ++
Sbjct: 990  VNWIKPPTMFAKLNTDGSCV--NGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSM 1047

Query: 366  THVLYLCLEKRIQNVHFELDYKRLVNMIMGASAFPWRFYSELSCIRSTILAHKYVLRHVY 545
             H + LC+++ +  +  E D   L   I    + PWR Y  +  I+  +  H +++ H  
Sbjct: 1048 LHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCL 1107

Query: 546  REPNFVADNL 575
            RE N  AD L
Sbjct: 1108 REANQPADKL 1117


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