BLASTX nr result
ID: Cephaelis21_contig00042590
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00042590 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12 gb|ACU33853.1| PPR1 protein [Capsicum annuum] 77 2e-12 ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 ref|XP_002514843.1| pentatricopeptide repeat-containing protein,... 74 1e-11 ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11 >ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like [Glycine max] Length = 550 Score = 76.6 bits (187), Expect = 2e-12 Identities = 35/72 (48%), Positives = 49/72 (68%) Frame = -2 Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46 M PLP+V++FN +LG +VKM HY AISL + M ++GI + T++ +INCYC G + Sbjct: 72 MHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGF 131 Query: 45 GFSLLGAFFKRG 10 FS+LG KRG Sbjct: 132 AFSVLGMVLKRG 143 >gb|ACU33853.1| PPR1 protein [Capsicum annuum] Length = 577 Score = 76.6 bits (187), Expect = 2e-12 Identities = 33/73 (45%), Positives = 49/73 (67%) Frame = -2 Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46 M+PLP+VIDF++L ++ M HYS +SL+R M + GI ++D +N V N YCL R+D Sbjct: 56 MKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDC 115 Query: 45 GFSLLGAFFKRGL 7 FS+L + K G+ Sbjct: 116 AFSVLPIYLKTGI 128 >ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa] Length = 585 Score = 75.1 bits (183), Expect = 6e-12 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 2/77 (2%) Frame = -2 Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGR--V 52 +RPLP V+ FN+LLG LVK HYS ISL + M + IR N YT+ +INC C R V Sbjct: 63 IRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHV 122 Query: 51 DLGFSLLGAFFKRGLVP 1 FS LG FK GL P Sbjct: 123 HFAFSALGKMFKLGLQP 139 >ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 594 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/75 (46%), Positives = 44/75 (58%) Frame = -2 Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46 M P P + FNQLL LV+M HY +S+YR M G+ + YT+ +INC C V L Sbjct: 98 MNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGL 157 Query: 45 GFSLLGAFFKRGLVP 1 GFS+LG FK G P Sbjct: 158 GFSVLGKIFKLGFKP 172 >ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 527 Score = 73.6 bits (179), Expect = 2e-11 Identities = 32/75 (42%), Positives = 51/75 (68%) Frame = -2 Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46 +R P +++FN+++G LVKM HY AISL++ M V+GI + +T+N +INC+C G++ Sbjct: 4 VRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTF 63 Query: 45 GFSLLGAFFKRGLVP 1 F++LG K G P Sbjct: 64 SFTVLGKILKLGYQP 78