BLASTX nr result

ID: Cephaelis21_contig00042590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042590
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          77   2e-12
ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    74   1e-11
ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11

>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/72 (48%), Positives = 49/72 (68%)
 Frame = -2

Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46
           M PLP+V++FN +LG +VKM HY  AISL + M ++GI  +  T++ +INCYC  G +  
Sbjct: 72  MHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGF 131

Query: 45  GFSLLGAFFKRG 10
            FS+LG   KRG
Sbjct: 132 AFSVLGMVLKRG 143


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = -2

Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46
           M+PLP+VIDF++L   ++ M HYS  +SL+R M + GI ++D  +N V N YCL  R+D 
Sbjct: 56  MKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDC 115

Query: 45  GFSLLGAFFKRGL 7
            FS+L  + K G+
Sbjct: 116 AFSVLPIYLKTGI 128


>ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -2

Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGR--V 52
           +RPLP V+ FN+LLG LVK  HYS  ISL + M +  IR N YT+  +INC C   R  V
Sbjct: 63  IRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHV 122

Query: 51  DLGFSLLGAFFKRGLVP 1
              FS LG  FK GL P
Sbjct: 123 HFAFSALGKMFKLGLQP 139


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 44/75 (58%)
 Frame = -2

Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46
           M P P +  FNQLL  LV+M HY   +S+YR M   G+  + YT+  +INC C    V L
Sbjct: 98  MNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGL 157

Query: 45  GFSLLGAFFKRGLVP 1
           GFS+LG  FK G  P
Sbjct: 158 GFSVLGKIFKLGFKP 172


>ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/75 (42%), Positives = 51/75 (68%)
 Frame = -2

Query: 225 MRPLPTVIDFNQLLGRLVKMNHYSPAISLYRNMCVQGIRVNDYTMNTVINCYCLEGRVDL 46
           +R  P +++FN+++G LVKM HY  AISL++ M V+GI  + +T+N +INC+C  G++  
Sbjct: 4   VRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTF 63

Query: 45  GFSLLGAFFKRGLVP 1
            F++LG   K G  P
Sbjct: 64  SFTVLGKILKLGYQP 78


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