BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042579
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   111   7e-23
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   3e-22
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   2e-20
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   102   3e-20
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   100   2e-19

>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/97 (50%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   VIYKVISKILSARMTKVLPLIIDDAQSVFVKGRIMVENIHMTQELIDKYVRKRVSPRCLI 182
           VIYK+ISKIL++RM  VL  ++ + QS FVKGR++ +NI ++ EL+  Y RK +SPRC++
Sbjct: 205 VIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMV 264

Query: 183 KVDIRKAYALVGWPFLRSIMHGLGFPPVFIEWVMECV 293
           K+D++KAY  V WPF++ +M  LGF   F+ WVM C+
Sbjct: 265 KIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCL 301


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/97 (50%), Positives = 71/97 (73%)
 Frame = +3

Query: 3   VIYKVISKILSARMTKVLPLIIDDAQSVFVKGRIMVENIHMTQELIDKYVRKRVSPRCLI 182
           VIYK+ISK+L+ RM  ++  ++++AQS F+ GR + +NI +  ELI  Y RK +SPRC++
Sbjct: 522 VIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIM 581

Query: 183 KVDIRKAYALVGWPFLRSIMHGLGFPPVFIEWVMECV 293
           KVDIRKAY  V W FL ++++  GFP  F+ W+MECV
Sbjct: 582 KVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECV 618


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/96 (52%), Positives = 68/96 (70%)
 Frame = +3

Query: 6   IYKVISKILSARMTKVLPLIIDDAQSVFVKGRIMVENIHMTQELIDKYVRKRVSPRCLIK 185
           +YK+ISKIL+ R+  V+  ++D AQ+ F+  R + +NI +  ELI  Y R+ VSPRC+IK
Sbjct: 526 LYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIK 585

Query: 186 VDIRKAYALVGWPFLRSIMHGLGFPPVFIEWVMECV 293
           VDIRKAY  V W FL S++  LGFP +FI W+M CV
Sbjct: 586 VDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACV 621


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/97 (49%), Positives = 66/97 (68%)
 Frame = +3

Query: 3    VIYKVISKILSARMTKVLPLIIDDAQSVFVKGRIMVENIHMTQELIDKYVRKRVSPRCLI 182
            VIYKVISKI++ R+  VLP  I   QS FVK R+++EN+ +  EL+  Y +  +S RC I
Sbjct: 952  VIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISGRCAI 1011

Query: 183  KVDIRKAYALVGWPFLRSIMHGLGFPPVFIEWVMECV 293
            K+DI KA+  V W FL++++  L FPP F+ WVM CV
Sbjct: 1012 KIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCV 1048


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/97 (47%), Positives = 66/97 (68%)
 Frame = +3

Query: 3   VIYKVISKILSARMTKVLPLIIDDAQSVFVKGRIMVENIHMTQELIDKYVRKRVSPRCLI 182
           V+YKVISKI++ R+ +VLP  I   QS F+K R+++EN+ +  EL+  Y +  VS RC I
Sbjct: 55  VLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDSVSERCAI 114

Query: 183 KVDIRKAYALVGWPFLRSIMHGLGFPPVFIEWVMECV 293
           K+DI KA+  V W FLR+++  L FP  F+ W+M CV
Sbjct: 115 KIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCV 151