BLASTX nr result

ID: Cephaelis21_contig00042523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042523
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22611.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN79447.1| hypothetical protein VITISV_037464 [Vitis vinifera]    71   8e-11
ref|XP_002272642.1| PREDICTED: uncharacterized protein LOC100241...    64   2e-08
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...    62   6e-08
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...    61   1e-07

>emb|CBI22611.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/76 (47%), Positives = 52/76 (68%)
 Frame = +1

Query: 25  RTTKKLNVAVDLSSDNLTNKSQLGHDLNSGILKLNALSALSGKMRITLMFKKKKTTNMNC 204
           R+TKK+NV VD++S+N+++ S L  D+NSG L L     L+GK+ +  +FKKKK+  MNC
Sbjct: 221 RSTKKMNVTVDVTSNNVSSNSNLASDINSGFLTLTGQGKLNGKVHLMKVFKKKKSPQMNC 280

Query: 205 TIAIGLAEQSIREINC 252
           TI I L  + I+E  C
Sbjct: 281 TIKINLENKVIQEWKC 296


>emb|CAN79447.1| hypothetical protein VITISV_037464 [Vitis vinifera]
          Length = 186

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/77 (41%), Positives = 51/77 (66%)
 Frame = +1

Query: 25  RTTKKLNVAVDLSSDNLTNKSQLGHDLNSGILKLNALSALSGKMRITLMFKKKKTTNMNC 204
           R+TK+ N+ V +SS  + N  QL  DLNSG+L L++ + LSGK+ +  +FKKKK+  M+C
Sbjct: 110 RSTKRFNITVPISSSKVNNHRQLRRDLNSGVLNLSSTAKLSGKIHLFKIFKKKKSAEMSC 169

Query: 205 TIAIGLAEQSIREINCQ 255
           T+ +     SI  ++C+
Sbjct: 170 TMELHTNTSSIENLSCK 186


>ref|XP_002272642.1| PREDICTED: uncharacterized protein LOC100241699 [Vitis vinifera]
          Length = 213

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/77 (33%), Positives = 49/77 (63%)
 Frame = +1

Query: 25  RTTKKLNVAVDLSSDNLTNKSQLGHDLNSGILKLNALSALSGKMRITLMFKKKKTTNMNC 204
           R TK++NV +D+ SD L N   L  D++SG + L   + ++GK+R+  + +++ T  MNC
Sbjct: 137 RKTKRMNVTLDVRSDRLWNDKNLSSDISSGSVNLTTYAQVTGKVRVMKVVRRRTTARMNC 196

Query: 205 TIAIGLAEQSIREINCQ 255
           ++ + L   SI+++ C+
Sbjct: 197 SMTLNLTSSSIQDLVCR 213


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/84 (33%), Positives = 50/84 (59%)
 Frame = +1

Query: 4   PATQAGWRTTKKLNVAVDLSSDNLTNKSQLGHDLNSGILKLNALSALSGKMRITLMFKKK 183
           P  QA  R T K+NV +++  D+L +   L  D++SGIL +N  S + G++++  + KK 
Sbjct: 132 PPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTYSRVPGRVKMLKIIKKH 191

Query: 184 KTTNMNCTIAIGLAEQSIREINCQ 255
               MNC++ + +  +SI+E  C+
Sbjct: 192 VVVKMNCSVTVNITSRSIQEQKCK 215


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/83 (30%), Positives = 51/83 (61%)
 Frame = +1

Query: 4   PATQAGWRTTKKLNVAVDLSSDNLTNKSQLGHDLNSGILKLNALSALSGKMRITLMFKKK 183
           P  ++  R T ++NV +D+ +D + +   L  D++SG+L +N+ +++ G++++  M KK 
Sbjct: 138 PPGKSKARKTMRMNVTIDIMTDKIMSHPGLQDDISSGLLTMNSYTSVGGRVKLLNMIKKY 197

Query: 184 KTTNMNCTIAIGLAEQSIREINC 252
               MNC+I + +  QSI++  C
Sbjct: 198 VVVKMNCSITVNITSQSIQDQKC 220


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