BLASTX nr result
ID: Cephaelis21_contig00042520
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00042520 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19924.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-12 ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi... 68 7e-10 ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 65 6e-09 ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 >emb|CBI19924.3| unnamed protein product [Vitis vinifera] Length = 912 Score = 76.3 bits (186), Expect = 3e-12 Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Frame = +1 Query: 1 AASFVNHVLHKATAANHHKQPQPASAKSLTPT-ILNHLRFGRITKAVSILFSSPVPFDFS 177 AAS +N +L + T H + P +K+LT T +L HL GR+ KAVSILF+SPVPF FS Sbjct: 5 AASVLNRLLQRNT---HKPKALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFS 61 Query: 178 LYASLFQICASNKA 219 LYA LFQIC+SN A Sbjct: 62 LYARLFQICSSNLA 75 >ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540 [Vitis vinifera] Length = 711 Score = 76.3 bits (186), Expect = 3e-12 Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Frame = +1 Query: 1 AASFVNHVLHKATAANHHKQPQPASAKSLTPT-ILNHLRFGRITKAVSILFSSPVPFDFS 177 AAS +N +L + T H + P +K+LT T +L HL GR+ KAVSILF+SPVPF FS Sbjct: 5 AASVLNRLLQRNT---HKPKALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPFS 61 Query: 178 LYASLFQICASNKA 219 LYA LFQIC+SN A Sbjct: 62 LYARLFQICSSNLA 75 >ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540-like [Glycine max] Length = 698 Score = 68.2 bits (165), Expect = 7e-10 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = +1 Query: 1 AASFVNHVLHKATAANH-HKQPQPASAKSLTPTILNHLRFGRITKAVSILFSSPVPFDFS 177 AAS +N +L K H H Q QPA+ ++ TIL +L+ GRI KA SILF+ P PF FS Sbjct: 5 AASILNQLLRKQNLKPHPHSQTQPAT-NAVINTILTYLKAGRIRKATSILFAFPKPFPFS 63 Query: 178 LYASLFQICASNKA 219 LYA F++C+S++A Sbjct: 64 LYALFFRLCSSHRA 77 >ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 718 Score = 65.1 bits (157), Expect = 6e-09 Identities = 34/70 (48%), Positives = 47/70 (67%) Frame = +1 Query: 1 AASFVNHVLHKATAANHHKQPQPASAKSLTPTILNHLRFGRITKAVSILFSSPVPFDFSL 180 A+S +N +L T Q +P +K+LT TI+NHL+ R+ KAVSILF+S +SL Sbjct: 3 ASSILNRILSNNTCKT---QTKPTKSKALTNTIINHLKANRLQKAVSILFASNSSVPYSL 59 Query: 181 YASLFQICAS 210 YASLFQ+C+S Sbjct: 60 YASLFQLCSS 69 >ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa] Length = 709 Score = 62.0 bits (149), Expect = 5e-08 Identities = 34/72 (47%), Positives = 49/72 (68%) Frame = +1 Query: 4 ASFVNHVLHKATAANHHKQPQPASAKSLTPTILNHLRFGRITKAVSILFSSPVPFDFSLY 183 AS ++ +L T + Q +PA+ K+LT IL+HL R+ +AVSILF+SP F +SLY Sbjct: 4 ASILSSLLSNKTL---NLQTRPANVKALTKQILSHLEANRLKQAVSILFASPDCFAYSLY 60 Query: 184 ASLFQICASNKA 219 A LFQ+C+S+ A Sbjct: 61 AHLFQVCSSSLA 72