BLASTX nr result
ID: Cephaelis21_contig00041460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00041460
(723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi... 347 1e-93
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2... 324 1e-86
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,... 323 2e-86
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 317 2e-84
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi... 317 2e-84
>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Vitis vinifera]
gi|296084180|emb|CBI24568.3| unnamed protein product
[Vitis vinifera]
Length = 516
Score = 347 bits (891), Expect = 1e-93
Identities = 163/240 (67%), Positives = 196/240 (81%)
Frame = -3
Query: 721 FDLMPKREESAFPWNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLG 542
FD M +R SAF WNSLI+GYAE+ ++EDA+ALYFQM EEGV PD +TFPRVLKACGG+G
Sbjct: 137 FDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRVLKACGGIG 196
Query: 541 SIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLT 362
SI V EEVHRH +R G+ +D F LNALVD+YAKCGDIVKARKVF +I+ +D VSWNSMLT
Sbjct: 197 SISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCRDSVSWNSMLT 256
Query: 361 GYIRHGLELEALRIVRIMLREGLQPDCVTLSALLPSMSSLKIGGQIHGWVLRYGIEWDLS 182
GYIRHGL L+AL I R ML+ G +PD V +S ++ + SLK+ GQIHGWVLR G++W+LS
Sbjct: 257 GYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVVTGVPSLKLAGQIHGWVLRRGVQWNLS 316
Query: 181 IANSLIAFYSNCNRLEKACWLFEHMPARDLVSWNSIISAHSKDPKALVYFERMTKANFLP 2
IANSLI YSN +L++ACWLF+HMP RD+VSWNSIISAH KD KA+ YF RM KA+ LP
Sbjct: 317 IANSLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHRKDLKAITYFSRMQKADVLP 376
>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 324 bits (831), Expect = 1e-86
Identities = 153/240 (63%), Positives = 189/240 (78%)
Frame = -3
Query: 721 FDLMPKREESAFPWNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLG 542
FD M KR ESAFPWNSLIAGY E ++EDA+ALYFQM EEGV+PD++TFPRVLKACGG+G
Sbjct: 67 FDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKACGGIG 126
Query: 541 SIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLT 362
I++ E VHR +R G+ ND F LNALVD+YAKCGDIVKAR++F +I KD +SWNSMLT
Sbjct: 127 LIRIGEAVHRDLVRLGFANDGFVLNALVDMYAKCGDIVKARRIFDKIDCKDSISWNSMLT 186
Query: 361 GYIRHGLELEALRIVRIMLREGLQPDCVTLSALLPSMSSLKIGGQIHGWVLRYGIEWDLS 182
GYIRHGL EAL M+ +G++ D V +S +L ++SS ++ QIHGW++R G+EWD S
Sbjct: 187 GYIRHGLIAEALHTFHSMVHDGMELDSVAVSTILANVSSFEVAVQIHGWIVRRGMEWDFS 246
Query: 181 IANSLIAFYSNCNRLEKACWLFEHMPARDLVSWNSIISAHSKDPKALVYFERMTKANFLP 2
IANSLIA YSN +L++A WLF+HMP +D+VSWNSIISAH KD KAL YFE M + LP
Sbjct: 247 IANSLIAVYSNGRKLDRARWLFDHMPKKDIVSWNSIISAHCKDLKALTYFELMERDGALP 306
Score = 93.6 bits (231), Expect = 4e-17
Identities = 54/192 (28%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
Frame = -3
Query: 610 VEEGVDPDEYTFPRVLKACGGLGSIQVAEEVHR----HAIRYGYGNDEFALNALVDVYAK 443
+E+G+ D F +L+ C L +I++ ++HR + +R G + LV +Y+
Sbjct: 1 MEKGIRIDTQIFSSLLETCYRLNAIELGVKIHRLIPINLLRRNAG----ISSKLVRLYSS 56
Query: 442 CGDIVKARKVFGRIMDK--DLVSWNSMLTGYIRHGLELEALRIVRIMLREGLQPDCVTLS 269
CGD+ A +VF + + WNS++ GY GL +A+ + M EG++PD T
Sbjct: 57 CGDVEVAHQVFDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEEEGVEPDQFTFP 116
Query: 268 ALLPS---MSSLKIGGQIHGWVLRYGIEWDLSIANSLIAFYSNCNRLEKACWLFEHMPAR 98
+L + + ++IG +H ++R G D + N+L+ Y+ C + KA +F+ + +
Sbjct: 117 RVLKACGGIGLIRIGEAVHRDLVRLGFANDGFVLNALVDMYAKCGDIVKARRIFDKIDCK 176
Query: 97 DLVSWNSIISAH 62
D +SWNS+++ +
Sbjct: 177 DSISWNSMLTGY 188
>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 323 bits (829), Expect = 2e-86
Identities = 155/240 (64%), Positives = 189/240 (78%)
Frame = -3
Query: 721 FDLMPKREESAFPWNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLG 542
FD M R+ESAF WNSLIAGY+E+ ++EDA+ALYFQM EE V+PDE+TFPRVLKACGGLG
Sbjct: 151 FDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACGGLG 210
Query: 541 SIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLT 362
IQV E VHR IR G+ ND FA NALVD+YAKCGDIVKAR +F ++ KD VSWNSMLT
Sbjct: 211 LIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVSWNSMLT 270
Query: 361 GYIRHGLELEALRIVRIMLREGLQPDCVTLSALLPSMSSLKIGGQIHGWVLRYGIEWDLS 182
GY+RHGL +EA R ML++GL+ D V +S+LL ++SS K+G QIHGW+LR G++WDLS
Sbjct: 271 GYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLANVSSFKLGVQIHGWILRRGMQWDLS 330
Query: 181 IANSLIAFYSNCNRLEKACWLFEHMPARDLVSWNSIISAHSKDPKALVYFERMTKANFLP 2
IANSLI YS+ +L + WLF++M RD+VSWNSIISAH KDP+ L YFERM + P
Sbjct: 331 IANSLIVMYSSNGKLVQTRWLFDNMQERDVVSWNSIISAHCKDPQVLAYFERMENSGAFP 390
Score = 86.3 bits (212), Expect = 6e-15
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Frame = -3
Query: 610 VEEGVDPDEYTFPRVLKACGGLGSIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDI 431
+ +G+ D +L+ C L SI +HR + + L+ +YA CG +
Sbjct: 85 IGKGIKIDTQIISSLLETCYRLNSIDHGMRIHRLIPTSILRKNTGVSSKLLRLYASCGYM 144
Query: 430 VKARKVFGRIMDKD--LVSWNSMLTGYIRHGLELEALRIVRIMLREGLQPDCVTLSALLP 257
+A ++F + ++D +WNS++ GY GL +A+ + M E ++PD T +L
Sbjct: 145 DEAHQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLK 204
Query: 256 SMSSL---KIGGQIHGWVLRYGIEWDLSIANSLIAFYSNCNRLEKACWLFEHMPARDLVS 86
+ L ++G +H ++R G D +N+L+ Y+ C + KA +FE M ++D VS
Sbjct: 205 ACGGLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVS 264
Query: 85 WNSIISAH 62
WNS+++ +
Sbjct: 265 WNSMLTGY 272
>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Cucumis sativus]
Length = 489
Score = 317 bits (812), Expect = 2e-84
Identities = 151/240 (62%), Positives = 183/240 (76%)
Frame = -3
Query: 721 FDLMPKREESAFPWNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLG 542
FD M R SAF WNSLI+GYAE+ ++EDALALYFQM EEGV+PD +TFPRVLKACGG+G
Sbjct: 112 FDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIG 171
Query: 541 SIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLT 362
SIQ+ E VHRH +R G+ D F LNALVD+Y+KCG IV+ARKVF +I KD+VSWNSMLT
Sbjct: 172 SIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLT 231
Query: 361 GYIRHGLELEALRIVRIMLREGLQPDCVTLSALLPSMSSLKIGGQIHGWVLRYGIEWDLS 182
GY RHGL EAL I M++EG +PD V LS LL ++SS+K IHGWV+R+G+EW+LS
Sbjct: 232 GYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSNISSMKFKLHIHGWVIRHGVEWNLS 291
Query: 181 IANSLIAFYSNCNRLEKACWLFEHMPARDLVSWNSIISAHSKDPKALVYFERMTKANFLP 2
IANSLI Y+ C +L +A WLF+ MP +D+VSWNSIISAH +AL YFE M P
Sbjct: 292 IANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEALTYFEVMESLGVSP 351
Score = 95.5 bits (236), Expect = 1e-17
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Frame = -3
Query: 682 WNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLGSIQVAEEVHRHAI 503
WNS++ GY +H +AL ++ QM++EG +PD +L + S++ +H I
Sbjct: 226 WNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS---NISSMKFKLHIHGWVI 282
Query: 502 RYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLTGYIRHGLELEALR 323
R+G + N+L+ +YAKCG + +A+ +F ++ KD+VSWNS+++ + EAL
Sbjct: 283 RHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSA---EALT 339
Query: 322 IVRIMLREGLQPDCVTLSALLPSMSSL---KIGGQIHGWVL-RYGIEWDLSIANSLIAFY 155
+M G+ PD VT +LL + + L K G +++ + +YGI + ++ Y
Sbjct: 340 YFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVNLY 399
Query: 154 SNCNRLEKA 128
+E+A
Sbjct: 400 GRAGMIEEA 408
>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cucumis sativus]
Length = 489
Score = 317 bits (812), Expect = 2e-84
Identities = 151/240 (62%), Positives = 183/240 (76%)
Frame = -3
Query: 721 FDLMPKREESAFPWNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLG 542
FD M R SAF WNSLI+GYAE+ ++EDALALYFQM EEGV+PD +TFPRVLKACGG+G
Sbjct: 112 FDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIG 171
Query: 541 SIQVAEEVHRHAIRYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLT 362
SIQ+ E VHRH +R G+ D F LNALVD+Y+KCG IV+ARKVF +I KD+VSWNSMLT
Sbjct: 172 SIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLT 231
Query: 361 GYIRHGLELEALRIVRIMLREGLQPDCVTLSALLPSMSSLKIGGQIHGWVLRYGIEWDLS 182
GY RHGL EAL I M++EG +PD V LS LL ++SS+K IHGWV+R+G+EW+LS
Sbjct: 232 GYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSNISSMKFKLHIHGWVIRHGVEWNLS 291
Query: 181 IANSLIAFYSNCNRLEKACWLFEHMPARDLVSWNSIISAHSKDPKALVYFERMTKANFLP 2
IANSLI Y+ C +L +A WLF+ MP +D+VSWNSIISAH +AL YFE M P
Sbjct: 292 IANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSAEALTYFEVMESLGVSP 351
Score = 97.8 bits (242), Expect = 2e-18
Identities = 57/189 (30%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Frame = -3
Query: 682 WNSLIAGYAEMNIHEDALALYFQMVEEGVDPDEYTFPRVLKACGGLGSIQVAEEVHRHAI 503
WNS++ GY +H +AL ++ QM++EG +PD +L + S++ +H I
Sbjct: 226 WNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLS---NISSMKFKLHIHGWVI 282
Query: 502 RYGYGNDEFALNALVDVYAKCGDIVKARKVFGRIMDKDLVSWNSMLTGYIRHGLELEALR 323
R+G + N+L+ +YAKCG + +A+ +F ++ KD+VSWNS+++ + EAL
Sbjct: 283 RHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFNSA---EALT 339
Query: 322 IVRIMLREGLQPDCVTLSALLPSMSSL---KIGGQIHGWVL-RYGIEWDLSIANSLIAFY 155
+M G+ PD VT +LL + + L K GG+++ + +YGI + ++ Y
Sbjct: 340 YFEVMESLGVSPDGVTFVSLLSTCAHLGLVKEGGKLYFLMKGKYGIRPTIEHYACMVNLY 399
Query: 154 SNCNRLEKA 128
+E+A
Sbjct: 400 GRAGMIEEA 408