BLASTX nr result

ID: Cephaelis21_contig00041380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041380
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]    88   6e-16
ref|XP_002533976.1| hypothetical protein RCOM_0370700 [Ricinus c...    82   6e-14
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    79   3e-13
emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]    79   5e-13
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    78   7e-13

>emb|CAN61457.1| hypothetical protein VITISV_029796 [Vitis vinifera]
          Length = 358

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/100 (40%), Positives = 58/100 (58%)
 Frame = +1

Query: 10  MTNENRAKRGISDSVNCPQCNRAPETILHVLRDCPWAQEVWYSVLPSREVQERNAEQWEE 189
           MTN NR KRG++    C  CN + E  +HVLRDCP A   W  +LP  +  E  + +  E
Sbjct: 1   MTNGNRVKRGLASDSRCGGCNGSLEDAVHVLRDCPHAMAFWQVLLPGNKWNEFFSGECRE 60

Query: 190 WLRGLISNKDPVQGSEVQWNTFFAIICWQLWKRRNEVAFK 309
           WL   +  ++ ++G  +QWN  FA+ CW LW+ RN+  F+
Sbjct: 61  WLTKNVMRRE-IEGIPLQWNVLFALGCWWLWRWRNQRVFE 99


>ref|XP_002533976.1| hypothetical protein RCOM_0370700 [Ricinus communis]
           gi|223526039|gb|EEF28407.1| hypothetical protein
           RCOM_0370700 [Ricinus communis]
          Length = 139

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/101 (38%), Positives = 54/101 (53%)
 Frame = +1

Query: 4   RLMTNENRAKRGISDSVNCPQCNRAPETILHVLRDCPWAQEVWYSVLPSREVQERNAEQW 183
           +L+TN  R +  +SD  +C QC    E I H+LRDCP +  VW  +LP    Q   +   
Sbjct: 40  KLLTNHERVRWRMSDQSSCAQCTGDVEAIHHILRDCPSSMAVWLKILPMCHWQTFLSLSV 99

Query: 184 EEWLRGLISNKDPVQGSEVQWNTFFAIICWQLWKRRNEVAF 306
           E+WL   + N+D V  + ++W T F   CW LWK RN   F
Sbjct: 100 EQWLLYNLLNEDGV-ATSIKWKTLFGTACWMLWKFRNATLF 139


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/95 (43%), Positives = 54/95 (56%)
 Frame = +1

Query: 7    LMTNENRAKRGISDSVNCPQCNRAPETILHVLRDCPWAQEVWYSVLPSREVQERNAEQWE 186
            +MTN  R +R +S++  C  CN A ETILHVLRDCP  + +W  +LP R   E  ++   
Sbjct: 927  IMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLL 986

Query: 187  EWLRGLISNKDPVQGSEVQWNTFFAIICWQLWKRR 291
            EW   L +N DPV+G    W T F +  W  WK R
Sbjct: 987  EW---LFTNMDPVKGI---WPTLFGMGIWWAWKWR 1015


>emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
          Length = 655

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/100 (35%), Positives = 53/100 (53%)
 Frame = +1

Query: 10  MTNENRAKRGISDSVNCPQCNRAPETILHVLRDCPWAQEVWYSVLPSREVQERNAEQWEE 189
           MTN NR K G++    C  CN + E   HVLRDCP     W  +LP  +  E  + +  E
Sbjct: 1   MTNGNRVKXGLASDSRCEGCNGSLEDAXHVLRDCPHVMTFWQVLLPGNKWNEFFSGECRE 60

Query: 190 WLRGLISNKDPVQGSEVQWNTFFAIICWQLWKRRNEVAFK 309
           WL   +  ++ ++G  ++WN  F + CW LW  +N+  F+
Sbjct: 61  WLTKNVMRRE-IEGIPLZWNVLFTLGCWWLWCWQNQRVFE 99


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = +1

Query: 4   RLMTNENRAKRGISDSVNCPQCNRAPETILHVLRDCPWAQEVWYSVLPSREVQERNAEQW 183
           R++TN  R+K G+  S  CP C R  ET++HVLRDC  + +VW  ++P   +    +   
Sbjct: 487 RILTNYRRSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDC 546

Query: 184 EEWLRGLISNKDPVQGSEVQWNTFFAIICWQLWKRRN----EVAFKQELRPS 327
            EW+   + NK  +  +   W T F   CW LW  RN    E+ F++   P+
Sbjct: 547 REWVFNNL-NKKGIGDNPATWQTTFMTTCWYLWNWRNKSIFEIGFQRPSNPT 597


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