BLASTX nr result

ID: Cephaelis21_contig00041346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041346
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   173   2e-41
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   157   1e-36
ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, p...   143   2e-32
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   143   2e-32

>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score =  173 bits (438), Expect = 2e-41
 Identities = 87/144 (60%), Positives = 102/144 (70%), Gaps = 7/144 (4%)
 Frame = -3

Query: 411  CMYCRQTGHSSDFCPSRVSHS-YPRTQEFNQQNGESSIPCNSCGALCVLRTANTANNRGR 235
            C+YC QTGH+S  CPSR+S + + ++   NQQNGESSIPC++CG  CVLRTANTANNRGR
Sbjct: 759  CIYCYQTGHASTDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGR 818

Query: 234  KFYSCQLQGCNFFVWEDSMSGGS---SVPHANVSNFASNP--XXXXXXXXXXXXXXXGVA 70
            KFYSC  Q CNFFVWED+++ GS   S P  N+SN ASNP                  V 
Sbjct: 819  KFYSCSSQACNFFVWEDNLNNGSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVT 878

Query: 69   FVSATGEPITG-RCFICGDPSHFA 1
            FVSATGEPI+G RCF+CGDPSHFA
Sbjct: 879  FVSATGEPISGRRCFVCGDPSHFA 902


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/150 (54%), Positives = 95/150 (63%), Gaps = 12/150 (8%)
 Frame = -3

Query: 414 ACMYCRQTGHSSDFCPSRVSHSY-PRTQEFNQQNGESSIPCNSCGALCVLRTANTANNRG 238
           AC++C QTGHSS+ CPSRV  S   ++   N  +GESSIPCN CG  C+LRTANT NNRG
Sbjct: 432 ACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRG 491

Query: 237 RKFYSCQLQGCNFFVWEDSM---SGGSSVPHANVSNFASNP-------XXXXXXXXXXXX 88
           RKFYSCQ Q CNFFVWEDS+   SGG S   A   + ASNP                   
Sbjct: 492 RKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGA 551

Query: 87  XXXGVAFVSATGEPITG-RCFICGDPSHFA 1
                 FVSATG+P++G RCF+CGDPSHFA
Sbjct: 552 RTSDTTFVSATGDPVSGRRCFVCGDPSHFA 581


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/150 (54%), Positives = 95/150 (63%), Gaps = 12/150 (8%)
 Frame = -3

Query: 414  ACMYCRQTGHSSDFCPSRVSHSY-PRTQEFNQQNGESSIPCNSCGALCVLRTANTANNRG 238
            AC++C QTGHSS+ CPSRV  S   ++   N  +GESSIPCN CG  C+LRTANT NNRG
Sbjct: 757  ACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRG 816

Query: 237  RKFYSCQLQGCNFFVWEDSM---SGGSSVPHANVSNFASNP-------XXXXXXXXXXXX 88
            RKFYSCQ Q CNFFVWEDS+   SGG S   A   + ASNP                   
Sbjct: 817  RKFYSCQSQECNFFVWEDSLNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGA 876

Query: 87   XXXGVAFVSATGEPITG-RCFICGDPSHFA 1
                  FVSATG+P++G RCF+CGDPSHFA
Sbjct: 877  RTSDTTFVSATGDPVSGRRCFVCGDPSHFA 906


>ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, partial [Cucumis
           sativus]
          Length = 257

 Score =  143 bits (360), Expect = 2e-32
 Identities = 77/162 (47%), Positives = 96/162 (59%), Gaps = 21/162 (12%)
 Frame = -3

Query: 423 GRMACMYCRQTGHSSDFCPSRVSHSYPRTQEFNQQNGESSIPCNSCGALCVLRTANTANN 244
           G+  C++C+Q GHSS+ CPS+   S        +Q+GESS+ C+SCG+ CVLRTANTANN
Sbjct: 91  GQSVCIFCQQVGHSSNDCPSQ---SVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANN 147

Query: 243 RGRKFYSCQLQGCNFFVWEDSM---SGGSSVPHANVSNFASNP----------------- 124
           RGRKFY CQ Q CNFFVWED++   +GG+SV  +NV +  S P                 
Sbjct: 148 RGRKFYKCQSQECNFFVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGR 207

Query: 123 XXXXXXXXXXXXXXXGVAFVSATGEPITG-RCFICGDPSHFA 1
                             FVSATGEPI+  RCF+CGDPSHFA
Sbjct: 208 GRGRDRDRDRGQGQIAATFVSATGEPISDRRCFVCGDPSHFA 249


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  143 bits (360), Expect = 2e-32
 Identities = 77/162 (47%), Positives = 96/162 (59%), Gaps = 21/162 (12%)
 Frame = -3

Query: 423  GRMACMYCRQTGHSSDFCPSRVSHSYPRTQEFNQQNGESSIPCNSCGALCVLRTANTANN 244
            G+  C++C+Q GHSS+ CPS+   S        +Q+GESS+ C+SCG+ CVLRTANTANN
Sbjct: 759  GQSVCIFCQQVGHSSNDCPSQ---SVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANN 815

Query: 243  RGRKFYSCQLQGCNFFVWEDSM---SGGSSVPHANVSNFASNP----------------- 124
            RGRKFY CQ Q CNFFVWED++   +GG+SV  +NV +  S P                 
Sbjct: 816  RGRKFYKCQSQECNFFVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGR 875

Query: 123  XXXXXXXXXXXXXXXGVAFVSATGEPITG-RCFICGDPSHFA 1
                              FVSATGEPI+  RCF+CGDPSHFA
Sbjct: 876  GRGRDRDRDRGQGQIAATFVSATGEPISDRRCFVCGDPSHFA 917


Top