BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041341
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            106   5e-25
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   101   3e-21
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          95   6e-21
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    96   2e-20
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]    91   3e-20

>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  106 bits (265), Expect(2) = 5e-25
 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 11/154 (7%)
 Frame = -2

Query: 512 QVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFLVSQGYKRADADPCVYIQSQW*IHNSS 333
           +VKGKE+ VCKLKKSLYGLKQAPRQWY KFDSF+ +  YKR  ADPCVY + ++   N  
Sbjct: 305 EVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFR-KFSEGNFI 363

Query: 332 LIC**YVNHWTRYRHD*QVEKRIVKGV*HERFELNKAYSWNGYYPRPRD**VVVI----T 165
           ++C         Y  D  +  + V+ +   + +L+K++      P  +   + +      
Sbjct: 364 ILC--------LYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKA 415

Query: 164 GKIY*T-------VLQRFNMNNAKPVSTPIAAHF 84
           GK++ +       VL+RFNM NAKPV+TP+AAHF
Sbjct: 416 GKLWLSQENYIERVLERFNMKNAKPVNTPLAAHF 449



 Score = 32.7 bits (73), Expect(2) = 5e-25
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -1

Query: 87  FQLSKESSSTTGKEREDMFDVPYSSAV 7
           F+LSK    TT KE+E M  +PYSS V
Sbjct: 449 FKLSKRCCPTTEKEKESMSHIPYSSVV 475


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  101 bits (252), Expect(2) = 3e-21
 Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
 Frame = -2

Query: 509  VKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFLVSQGYKRADADPCVYIQSQW*IHNSSL 330
            V GKED VCKLK+SLYGLKQ+PRQWYK+FDSF++S G+KR++ D CVYI+    ++ S +
Sbjct: 942  VPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKF---VNGSPI 998

Query: 329  IC**YVNHWTRYRHD*QVEKRIVKGV*HE--RFELNKAYSWNGY-YPRPRD**VVVITGK 159
                YV+         +    + K +  E    +L  A    G    R R+  ++ ++ +
Sbjct: 999  YLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQ 1058

Query: 158  IY-*TVLQRFNMNNAKPVSTPIAAHF 84
             Y   VLQRFNM++AKPVSTPIA HF
Sbjct: 1059 SYIKKVLQRFNMHDAKPVSTPIAPHF 1084



 Score = 25.0 bits (53), Expect(2) = 3e-21
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 87   FQLSKESSSTTGKEREDMFDVPYSSAV 7
            F+LS    ++T ++ E M  VPYSSAV
Sbjct: 1084 FKLSALQCASTDEDVEYMSRVPYSSAV 1110


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 95.1 bits (235), Expect(2) = 6e-21
 Identities = 61/154 (39%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
 Frame = -2

Query: 512  QVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFLVSQGYKRADADPCVYIQSQW*IHNSS 333
            +VKGKED VC+LKKSLYGLKQAPRQWYKKF S +   GYK+  +D CV++       +  
Sbjct: 943  KVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRY--SDDDF 1000

Query: 332  LIC**YVNHWTRYRHD*QVEKRIVKGV*HERFELNKAYSWNGYYPRPRD**VVVITG--- 162
            +I   YV+       D  +  R    +   + EL+K++S     P  +   + +I     
Sbjct: 1001 VILLLYVD-------DMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQN 1053

Query: 161  --------KIY*TVLQRFNMNNAKPVSTPIAAHF 84
                    K    VL+RF+MN AKPVSTP+  HF
Sbjct: 1054 KKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHF 1087



 Score = 30.4 bits (67), Expect(2) = 6e-21
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = -1

Query: 87   FQLSKESSSTTGKEREDMFDVPYSSAV 7
            F+L K+   ++ KE+E+M  VPYSSAV
Sbjct: 1087 FKLCKKQCPSSEKEKEEMQRVPYSSAV 1113


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 95.5 bits (236), Expect(2) = 2e-20
 Identities = 46/67 (68%), Positives = 57/67 (85%)
 Frame = -3

Query: 346  FIILLLYVDDMLIIGQDIDMISRLKRELSKVFDMKDLSSTRRILGMDIIRDRETSKLWLS 167
            FIILLLYVDDMLI+G+D  +I++LK +LSK FDMKDL   ++ILGM I+R+R + KLWLS
Sbjct: 1002 FIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLS 1061

Query: 166  QEKYIER 146
            QEKYIER
Sbjct: 1062 QEKYIER 1068



 Score = 28.5 bits (62), Expect(2) = 2e-20
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 84   QLSKESSSTTGKEREDMFDVPYSSAV 7
            +LSK+   TT +E+ +M  VPYSSAV
Sbjct: 1090 KLSKKMCPTTVEEKGNMAKVPYSSAV 1115



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
 Frame = -2

Query: 512  QVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFLVSQGYKRADADPCVYIQSQW*IHNSS 333
            +V GK+ MVCKL KSLYGLKQAPRQWY KFDSF+ SQ Y +  +DPCVY +      N+ 
Sbjct: 945  EVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF--SENNF 1002

Query: 332  LIC**YVNHWTRYRHD*QVEKRIVKGV*HERFELNKAYSWNGYYPRPRD**VVVI----- 168
            +I   YV+       D  +  ++ KG      +L+K++      P  +   + ++     
Sbjct: 1003 IILLLYVDDMLIVGKDKGLIAKL-KG------DLSKSFDMKDLGPAQQILGMKIVRERTS 1055

Query: 167  ------TGKIY*TVLQRFNMNNAKPVSTPIAAH 87
                    K    VL+RFNM NAKPVSTP+A H
Sbjct: 1056 RKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088


>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score = 90.9 bits (224), Expect(2) = 3e-20
 Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
 Frame = -2

Query: 509 VKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFLVSQGYKRADADPCVYIQSQW*IHNSSL 330
           +KGKED  CKLKKSLYGLKQAPRQWYKKF+S +  QGYK+  ++ CV++       +  +
Sbjct: 425 IKGKEDYACKLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSNHCVFVHKF--SDDDFV 482

Query: 329 IC**YVNHWTRYRHD*QVEKRIVKGV*HERFELNKAYSWNGYYPRPRD**VVV----ITG 162
           I   YV+       D  +  R V  +   + +L+K++S     P  +   + +     + 
Sbjct: 483 ILLLYVD-------DILIVGRNVSRIDKLKKQLSKSFSMKDLGPVKKILGIRIERDRASK 535

Query: 161 KIY*T-------VLQRFNMNNAKPVSTPIAAHFN*AR 72
           K+Y +       VL+RFNM+ AK V++P+A+HF  +R
Sbjct: 536 KLYMSQEQYIEKVLERFNMSKAKVVNSPLASHFKLSR 572



 Score = 32.3 bits (72), Expect(2) = 3e-20
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -1

Query: 87  FQLSKESSSTTGKEREDMFDVPYSSAV 7
           F+LS+  S +  KE+EDM  VPY+SAV
Sbjct: 568 FKLSRRHSPSIDKEKEDMRRVPYASAV 594