BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041275
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   101   5e-20
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   100   9e-20
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]         98   6e-19
emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi...    98   6e-19
gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indi...    98   6e-19

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score =  101 bits (252), Expect = 5e-20
 Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
 Frame = -2

Query: 411 DNSRFCELTL-DDVRQAVFSLDPDSALGSDVFRGLFYRTCWDIISHDLLIAV*DFFVGTP 235
           DN+    L L  +V+ AVF+L+ D A G + F G FY+T WDI+  D++ +V DFF+   
Sbjct: 434 DNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQ 493

Query: 234 VPRIIGSTVMVLLPKKSIPDAFTDFRPISLCNFLNKVFTRILFDRLASILHRLIFDEQTA 55
           + + I S ++VL+PK        D+RPI+L NF  K+ ++IL DRLA I  R+I  EQ  
Sbjct: 494 LAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRG 553

Query: 54  FLHGHDISDSIFLAQKMV 1
           F+   DIS  + LA + +
Sbjct: 554 FIRDRDISKCVILASEAI 571


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/128 (40%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
 Frame = -2

Query: 381 DDVRQAVFSLDPDSALGSDVFRGLFYRTCWDIISHDLLIAV*DFF-VGTPVPRIIGSTVM 205
           D+++QAVFSL+ DSA G D F   FY+  WDI+  D++ AV  FF  G  +P    +T +
Sbjct: 119 DEIKQAVFSLNNDSAPGPDGFGSCFYQIYWDIVKEDVIKAVLQFFNTGWILPNFNANT-L 177

Query: 204 VLLPKKSIPDAFTDFRPISLCNFLNKVFTRILFDRLASILHRLIFDEQTAFLHGHDISDS 25
           +L+PK    D+   FRPI++ NF  K+ ++IL DRLA I+  ++  EQ  F+ G +I D 
Sbjct: 178 ILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGRNIKDC 237

Query: 24  IFLAQKMV 1
           + LA + +
Sbjct: 238 VCLASEAI 245


>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = -2

Query: 408  NSRFC-ELTLDDVRQAVFSLDPDSALGSDVFRGLFYRTCWDIISHDLLIAV*DFFVGTPV 232
            N + C E   +++ QA+F + P  + G D F   FY+  W  +  D+++AV +FF    +
Sbjct: 973  NEKLCQEFKEEEIAQAIFQIGPLKSPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLM 1032

Query: 231  PRIIGSTVMVLLPKKSIPDAFTDFRPISLCNFLNKVFTRILFDRLASILHRLIFDEQTAF 52
            P  +  T +VL+PKK  P    D+RPISLCN + KV ++ L +RL  IL  L+  EQ+AF
Sbjct: 1033 PEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAF 1092

Query: 51   LHGHDISDSIFLA 13
            + G  I+D+  LA
Sbjct: 1093 IQGRMITDNALLA 1105


>emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
            gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza
            sativa Indica Group] gi|116309230|emb|CAH66320.1|
            OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = -2

Query: 408  NSRFC-ELTLDDVRQAVFSLDPDSALGSDVFRGLFYRTCWDIISHDLLIAV*DFFVGTPV 232
            N + C E   +++ QA+F + P  + G D F   FY+  W  +  D+++AV +FF    +
Sbjct: 973  NEKLCQEFKEEEIAQAIFQIGPLKSPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLM 1032

Query: 231  PRIIGSTVMVLLPKKSIPDAFTDFRPISLCNFLNKVFTRILFDRLASILHRLIFDEQTAF 52
            P  +  T +VL+PKK  P    D+RPISLCN + KV ++ L +RL  IL  L+  EQ+AF
Sbjct: 1033 PEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAF 1092

Query: 51   LHGHDISDSIFLA 13
            + G  I+D+  LA
Sbjct: 1093 IQGRMITDNALLA 1105


>gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
          Length = 1296

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = -2

Query: 408  NSRFC-ELTLDDVRQAVFSLDPDSALGSDVFRGLFYRTCWDIISHDLLIAV*DFFVGTPV 232
            N + C E   +++ QA+F + P  + G D F   FY+  W  +  D+++AV +FF    +
Sbjct: 798  NEKLCQEFKEEEIAQAIFQIGPLKSPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLM 857

Query: 231  PRIIGSTVMVLLPKKSIPDAFTDFRPISLCNFLNKVFTRILFDRLASILHRLIFDEQTAF 52
            P  +  T +VL+PKK  P    D+RPISLCN + KV ++ L +RL  IL  L+  EQ+AF
Sbjct: 858  PEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAF 917

Query: 51   LHGHDISDSIFLA 13
            + G  I+D+  LA
Sbjct: 918  IQGRMITDNALLA 930