BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041187
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   128   4e-28
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               128   4e-28
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...   128   4e-28
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               128   5e-28
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   127   7e-28

>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3    WLGLIQYAKPVIPNLDKILSPLYAKTSPQGNRRFEESDWTIVDQVKQLVRNLPPLHHPDA 182
            WLGL+ YA+  IP++ ++LSPLYAK SP G RR    DW ++D+++  V+NLP L  P A
Sbjct: 1640 WLGLLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPA 1699

Query: 183  NAYIILETDG----------WKKAKYDSRSTEKVCCYASGIFRPPKQAIDAEVY 314
            + +II+ETDG          WK A+YD RS+E+VC YASG F PPK  IDAE++
Sbjct: 1700 DCFIIIETDGCMDGWGGVCKWKVAQYDPRSSERVCAYASGKFNPPKSTIDAEIH 1753


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3    WLGLIQYAKPVIPNLDKILSPLYAKTSPQGNRRFEESDWTIVDQVKQLVRNLPPLHHPDA 182
            WLGL+ YA+  IP++ ++LSPLYAK SP G RR    DW ++D+++  V+NLP L  P A
Sbjct: 1625 WLGLLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPA 1684

Query: 183  NAYIILETDG----------WKKAKYDSRSTEKVCCYASGIFRPPKQAIDAEVY 314
            + +II+ETDG          WK A+YD RS+E+VC YASG F PPK  IDAE++
Sbjct: 1685 DCFIIIETDGCMDGWGGVCKWKLAQYDPRSSERVCAYASGKFNPPKSTIDAEIH 1738


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
            gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
            yellow mosaic virus]
          Length = 1983

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3    WLGLIQYAKPVIPNLDKILSPLYAKTSPQGNRRFEESDWTIVDQVKQLVRNLPPLHHPDA 182
            WLGL+ YA+  IP++ ++LSPLYAK SP G RR    DW ++D+++  V+NLP L  P A
Sbjct: 1641 WLGLLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPA 1700

Query: 183  NAYIILETDG----------WKKAKYDSRSTEKVCCYASGIFRPPKQAIDAEVY 314
            + +II+ETDG          WK A+YD RS+E+VC YASG F PPK  IDAE++
Sbjct: 1701 DCFIIIETDGCMDGWGGVCKWKVAQYDPRSSERVCAYASGKFNPPKSTIDAEIH 1754


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  128 bits (321), Expect = 5e-28
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3    WLGLIQYAKPVIPNLDKILSPLYAKTSPQGNRRFEESDWTIVDQVKQLVRNLPPLHHPDA 182
            WLGL+ YA+  IP++ ++LSPLYAK SP G RR    DW ++D+++  V+NLP L  P A
Sbjct: 1626 WLGLLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPA 1685

Query: 183  NAYIILETDG----------WKKAKYDSRSTEKVCCYASGIFRPPKQAIDAEVY 314
            + +II+ETDG          WK A+YD RS+E+VC YASG F PPK  IDAE++
Sbjct: 1686 DCFIIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPPKSTIDAEIH 1739


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3    WLGLIQYAKPVIPNLDKILSPLYAKTSPQGNRRFEESDWTIVDQVKQLVRNLPPLHHPDA 182
            WLGL+ YA+  IP++ ++LSPLYAK SP G RR    DW ++D+++  V+NLP L  P A
Sbjct: 1148 WLGLLNYARSYIPHMGRLLSPLYAKVSPTGERRVNRQDWALIDKIRAQVQNLPALELPPA 1207

Query: 183  NAYIILETDG----------WKKAKYDSRSTEKVCCYASGIFRPPKQAIDAEVY 314
            + +II+ETDG          WK A+YD RS+E+VC YASG F PPK  IDAE++
Sbjct: 1208 DCFIIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPPKSTIDAEIH 1261