BLASTX nr result
ID: Cephaelis21_contig00041152
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00041152 (1023 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 75 2e-11 emb|CBI24843.3| unnamed protein product [Vitis vinifera] 75 2e-11 ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 72 2e-10 ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arab... 72 2e-10 gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 66 2e-08 >ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis vinifera] Length = 761 Score = 75.5 bits (184), Expect = 2e-11 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = +1 Query: 25 LNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLSK 204 ++ + S LSLN ILEGK+RKI ARMF E LVLK GL DV QE PY +ITLK+T KLSK Sbjct: 699 ISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSK 758 Query: 205 EQF 213 +F Sbjct: 759 ARF 761 >emb|CBI24843.3| unnamed protein product [Vitis vinifera] Length = 709 Score = 75.5 bits (184), Expect = 2e-11 Identities = 40/63 (63%), Positives = 47/63 (74%) Frame = +1 Query: 25 LNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLSK 204 ++ + S LSLN ILEGK+RKI ARMF E LVLK GL DV QE PY +ITLK+T KLSK Sbjct: 647 ISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSK 706 Query: 205 EQF 213 +F Sbjct: 707 ARF 709 >ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis sativus] Length = 908 Score = 72.4 bits (176), Expect = 2e-10 Identities = 37/63 (58%), Positives = 46/63 (73%) Frame = +1 Query: 22 TLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLS 201 +++ + LSLN ILEGK RK+CARMF E LVLK+ GL DV Q+ PY +ITLK+T KLS Sbjct: 845 SISDNSNQDLSLNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKLS 904 Query: 202 KEQ 210 Q Sbjct: 905 MVQ 907 >ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata] gi|297318587|gb|EFH49009.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata] Length = 653 Score = 72.0 bits (175), Expect = 2e-10 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Frame = +1 Query: 4 KRQSSVTLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLK 183 +R SS +S SG LSLN ILEGK+RKI ARMF E LVLK+RGL D+ Q+ PY +I+LK Sbjct: 583 ERCSSSLTSSHASGDLSLNKILEGKTRKIAARMFYETLVLKSRGLIDMKQDQPYSDISLK 642 Query: 184 VTSKL-SKEQ 210 + L SK Q Sbjct: 643 LMPALFSKTQ 652 >gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana] Length = 692 Score = 65.9 bits (159), Expect = 2e-08 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = +1 Query: 4 KRQSSVTLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLK 183 + SS T +S SG LSL+ IL GK+RK+ ARMF E LVLK+RGL D+ Q+ PY +I LK Sbjct: 622 RSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALK 681 Query: 184 VTSKL 198 + L Sbjct: 682 LMPAL 686