BLASTX nr result

ID: Cephaelis21_contig00041152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041152
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    75   2e-11
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...    72   2e-10
ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arab...    72   2e-10
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops...    66   2e-08

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = +1

Query: 25  LNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLSK 204
           ++ + S  LSLN ILEGK+RKI ARMF E LVLK  GL DV QE PY +ITLK+T KLSK
Sbjct: 699 ISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSK 758

Query: 205 EQF 213
            +F
Sbjct: 759 ARF 761


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = +1

Query: 25  LNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLSK 204
           ++ + S  LSLN ILEGK+RKI ARMF E LVLK  GL DV QE PY +ITLK+T KLSK
Sbjct: 647 ISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSK 706

Query: 205 EQF 213
            +F
Sbjct: 707 ARF 709


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
            sativus]
          Length = 908

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +1

Query: 22   TLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLKVTSKLS 201
            +++   +  LSLN ILEGK RK+CARMF E LVLK+ GL DV Q+ PY +ITLK+T KLS
Sbjct: 845  SISDNSNQDLSLNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKLS 904

Query: 202  KEQ 210
              Q
Sbjct: 905  MVQ 907


>ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp.
           lyrata] gi|297318587|gb|EFH49009.1| hypothetical protein
           ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata]
          Length = 653

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +1

Query: 4   KRQSSVTLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLK 183
           +R SS   +S  SG LSLN ILEGK+RKI ARMF E LVLK+RGL D+ Q+ PY +I+LK
Sbjct: 583 ERCSSSLTSSHASGDLSLNKILEGKTRKIAARMFYETLVLKSRGLIDMKQDQPYSDISLK 642

Query: 184 VTSKL-SKEQ 210
           +   L SK Q
Sbjct: 643 LMPALFSKTQ 652


>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
          Length = 692

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +1

Query: 4   KRQSSVTLNSEGSGTLSLNLILEGKSRKICARMFNEMLVLKTRGLADVNQEAPYDNITLK 183
           +  SS T +S  SG LSL+ IL GK+RK+ ARMF E LVLK+RGL D+ Q+ PY +I LK
Sbjct: 622 RSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALK 681

Query: 184 VTSKL 198
           +   L
Sbjct: 682 LMPAL 686


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