BLASTX nr result

ID: Cephaelis21_contig00041079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041079
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   5e-20
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    92   3e-17
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              92   6e-17
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              92   6e-17
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              92   6e-17

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/87 (54%), Positives = 58/87 (66%)
 Frame = -2

Query: 263  SIPIYTLQTSVVPMGTCDKIDKIIRSFIWGSKEDKRSMHLVKWSAVCKPKSRGGLDLRQT 84
            SIP YT+Q++ +P  TCD ID+  RSF+WG +E KR +HLV W  + K K  GGL +R  
Sbjct: 805  SIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSM 864

Query: 83   RVVNEAFLIKLAWNLLVNPSSLCSLIL 3
            R  N AFL+KL W LL  PSSL S IL
Sbjct: 865  RQANSAFLVKLGWRLLAEPSSLWSRIL 891


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/90 (44%), Positives = 60/90 (66%)
 Frame = -2

Query: 272 VLQSIPIYTLQTSVVPMGTCDKIDKIIRSFIWGSKEDKRSMHLVKWSAVCKPKSRGGLDL 93
           VL SIP++T+ T  +P  T D +DK+ RSF+WGS   +R  HL+ W  VCKP+S GGL +
Sbjct: 321 VLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGI 380

Query: 92  RQTRVVNEAFLIKLAWNLLVNPSSLCSLIL 3
           R+ + +N+A L K+ W L+ +  SL + I+
Sbjct: 381 RKAQDMNKALLSKVGWRLIQDYHSLWARIM 410


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -2

Query: 269  LQSIPIYTLQTSVVPMGTCDKIDKIIRSFIWGSKEDKRSMHLVKWSAVCKPKSRGGLDLR 90
            L ++P YT+Q   +P+ TC++IDK  R+F+WG   + R +H V W+ +CKP++ GGL LR
Sbjct: 1333 LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 1392

Query: 89   QTRVVNEAFLIKLAWNLLVNPSSLCSLIL 3
              R  N AFL K+AW +  N   L   +L
Sbjct: 1393 MARDFNRAFLTKMAWQIFSNIDKLWVKVL 1421


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -2

Query: 269  LQSIPIYTLQTSVVPMGTCDKIDKIIRSFIWGSKEDKRSMHLVKWSAVCKPKSRGGLDLR 90
            L ++P YT+Q   +P+ TC++IDK  R+F+WG   + R +H V W+ +CKP++ GGL LR
Sbjct: 801  LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860

Query: 89   QTRVVNEAFLIKLAWNLLVNPSSLCSLIL 3
              R  N AFL K+AW +  N   L   +L
Sbjct: 861  MARDFNRAFLTKMAWQIFSNIDKLWVKVL 889


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -2

Query: 269  LQSIPIYTLQTSVVPMGTCDKIDKIIRSFIWGSKEDKRSMHLVKWSAVCKPKSRGGLDLR 90
            L ++P YT+Q   +P+ TC++IDK  R+F+WG   + R +H V W+ +CKP++ GGL LR
Sbjct: 801  LATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860

Query: 89   QTRVVNEAFLIKLAWNLLVNPSSLCSLIL 3
              R  N AFL K+AW +  N   L   +L
Sbjct: 861  MARDFNRAFLTKMAWQIFSNIDKLWVKVL 889


Top