BLASTX nr result
ID: Cephaelis21_contig00040803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00040803
(382 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 107 1e-21
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ... 102 4e-20
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ... 102 4e-20
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1016
Score = 107 bits (267), Expect = 1e-21
Identities = 55/126 (43%), Positives = 82/126 (65%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELLHSRMGETICNDKQEESNERKDLVLQGLDLQPNLITYTTLISRY 182
CK G++D AK L+ E+ SR + ++ ++ D L+L+ +LITYTT+IS Y
Sbjct: 193 CKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD----NLNLEADLITYTTIISTY 248
Query: 183 CQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEEMTRDGVDPNH 362
C+QH +EE ++YEEM++ G PDVVT +++++ L K GR EA+ L EM + GVDPNH
Sbjct: 249 CKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNH 308
Query: 363 VTYSIL 380
V Y+ L
Sbjct: 309 VAYTTL 314
Score = 58.9 bits (141), Expect = 4e-07
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELL----------HSRMGETICNDKQEESNERKDLVLQGLDLQPNL 152
CK + A+ L +E++ +S + +C D + + ++ + + PN
Sbjct: 249 CKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNH 308
Query: 153 ITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEE 332
+ YTTLI + E + ++++ G+ D+V CTT++ L KS + EA+ +F
Sbjct: 309 VAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRA 368
Query: 333 MTRDGVDPNHVTYSIL 380
+++ + PN +TY+ L
Sbjct: 369 LSKLNLIPNSITYTAL 384
Score = 58.5 bits (140), Expect = 5e-07
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 87 KQEESNERKDL--VLQGLDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVV 260
K + E +D+ L L+L PN ITYT LI YC+ ++E V S+ +EM + P+V+
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414
Query: 261 TCTTVIHTLLKSGRNLEAKLLFEEMTRDGVDPNHVTYSIL 380
T +++I+ K G EA + ++M + PN Y+IL
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAIL 454
Score = 57.4 bits (137), Expect = 1e-06
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +3
Query: 132 LDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLE 311
+ L PN TY +I YC+Q E++ L ++ EM + P +TC T++ L ++G +
Sbjct: 581 MGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEK 640
Query: 312 AKLLFEEMTRDGVDPNHVTYSIL 380
A + EM+ G+ PN V + +L
Sbjct: 641 AMNVLNEMSVMGIHPNLVIHRVL 663
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +3
Query: 153 ITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEE 332
+TY LI YC+ V++ L+ Y +ML G+ P++VT ++ LL +G E LF++
Sbjct: 728 VTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDK 787
Query: 333 MTRDGVDPNHVTYSIL 380
M +G++P+ TY L
Sbjct: 788 MKENGLNPDASTYDTL 803
>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
predicted protein [Populus trichocarpa]
Length = 864
Score = 102 bits (254), Expect = 3e-20
Identities = 55/126 (43%), Positives = 74/126 (58%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELLHSRMGETICNDKQEESNERKDLVLQGLDLQPNLITYTTLISRY 182
C++G + +MD L+ ND +N L+PNL+TYTTLIS Y
Sbjct: 124 CRIGSVKYGEWVMDNLIDDM------NDDDGTTN-----------LEPNLVTYTTLISAY 166
Query: 183 CQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEEMTRDGVDPNH 362
C+QH + E LS+YEEM+ G PDVVT +++I+ L K G EAK L EM + GV+PNH
Sbjct: 167 CKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNH 226
Query: 363 VTYSIL 380
V Y+IL
Sbjct: 227 VVYAIL 232
>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 989
Score = 102 bits (253), Expect = 4e-20
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELLHSRMGETICNDKQEESNERKDLVLQG--LDLQPNLITYTTLIS 176
CK GD A+ L +E+L K E+ + D+V Q +LQP L+TYTTLI+
Sbjct: 278 CKTGDLTRAESLFNEILGFW--------KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIA 329
Query: 177 RYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEEMTRDGVDP 356
YC+ VEE S+Y++M+M G+ PDVVTC+++++ + G+ EA +LF EM G+DP
Sbjct: 330 AYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDP 389
Query: 357 NHVTYSIL 380
NHV+Y+ +
Sbjct: 390 NHVSYATI 397
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 132 LDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLE 311
+ L PN ++Y T+I+ + V E ++ +M++ G+ D+VTCTTV+ L K G+ E
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444
Query: 312 AKLLFEEMTRDGVDPNHVTYSIL 380
A+ +FE + + + PN VTYS L
Sbjct: 445 AEEVFETILKLNLAPNCVTYSAL 467
>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 102 bits (253), Expect = 4e-20
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELLHSRMGETICNDKQEESNERKDLVLQG--LDLQPNLITYTTLIS 176
CK GD A+ L +E+L K E+ + D+V Q +LQP L+TYTTLI+
Sbjct: 278 CKTGDLTRAESLFNEILGFW--------KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIA 329
Query: 177 RYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEEMTRDGVDP 356
YC+ VEE S+Y++M+M G+ PDVVTC+++++ + G+ EA +LF EM G+DP
Sbjct: 330 AYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDP 389
Query: 357 NHVTYSIL 380
NHV+Y+ +
Sbjct: 390 NHVSYATI 397
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 132 LDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLE 311
+ L PN ++Y T+I+ + V E ++ +M++ G+ D+VTCTTV+ L K G+ E
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444
Query: 312 AKLLFEEMTRDGVDPNHVTYSIL 380
A+ +FE + + + PN VTYS L
Sbjct: 445 AEEVFETILKLNLAPNCVTYSAL 467
>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 100 bits (248), Expect = 2e-19
Identities = 50/130 (38%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Frame = +3
Query: 3 CKVGDFDNAKRLMDELLHSRMGETICNDKQEESNERKDLVLQ---GL-DLQPNLITYTTL 170
CK GD A+ +++E+L R + +ES D ++ GL DLQP ++T+TTL
Sbjct: 191 CKRGDLAKAESVVNEILGFR--------RDDESGVLNDCGVETWDGLRDLQPTVVTWTTL 242
Query: 171 ISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGRNLEAKLLFEEMTRDGV 350
I+ YC+ +++ S+YE+M+M+G+ PDVVTC+++++ L + G+ EA +L EM G+
Sbjct: 243 IAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGL 302
Query: 351 DPNHVTYSIL 380
DPNHV+Y+ +
Sbjct: 303 DPNHVSYTTI 312
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/86 (33%), Positives = 53/86 (61%)
Frame = +3
Query: 123 LQGLDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLKSGR 302
+ + L PN ++YTT+IS + V E + +M++ G+ D+V CTT++ L K+G+
Sbjct: 297 MYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGK 356
Query: 303 NLEAKLLFEEMTRDGVDPNHVTYSIL 380
+ EA+ +F+ + + + PN VTY+ L
Sbjct: 357 SKEAEEMFQTILKLNLVPNCVTYTAL 382
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/89 (32%), Positives = 51/89 (57%)
Frame = +3
Query: 114 DLVLQGLDLQPNLITYTTLISRYCQQHEVEEVLSIYEEMLMTGLFPDVVTCTTVIHTLLK 293
++V++G+ +++TY LI YC VE+ + Y +ML++G+ P++ T ++ L
Sbjct: 715 EMVIKGISA--DIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLST 772
Query: 294 SGRNLEAKLLFEEMTRDGVDPNHVTYSIL 380
+G +A L EM G+ PN TY+IL
Sbjct: 773 NGLMRDADKLVSEMRERGLVPNATTYNIL 801