BLASTX nr result

ID: Cephaelis21_contig00040297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040297
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vit...    97   2e-18
ref|XP_002319292.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002894644.1| F-box family protein [Arabidopsis lyrata sub...    83   2e-14
ref|NP_176035.1| F-box protein [Arabidopsis thaliana] gi|7526837...    79   3e-13
ref|NP_001185249.1| F-box protein [Arabidopsis thaliana] gi|3321...    79   3e-13

>ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vitis vinifera]
          Length = 730

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 61/128 (47%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
 Frame = +1

Query: 58  APGLKLFTYSGVMAGFSFGSLNLDMEASLDFGLQKEY---GWYGEDLYHILNEIGGVKTL 228
           A  L+ F YSG++  F         EA LDFGL+ E+   G+ G+ L  IL  I    TL
Sbjct: 245 AQKLQYFKYSGLVKSFLLEDQPDVEEAELDFGLESEFDNSGYCGDTLQDILRNIYS-NTL 303

Query: 229 TVCPYMLQVICTWEEPFGLLPALERLKHLILKASLINRDEFYGITFFLSSCPNLEILTID 408
           TVC YMLQ + + EEP  L P L+ ++HLILK S+ +  E YGI+F L SCP L++LTID
Sbjct: 304 TVCSYMLQELPSGEEPLRLYPYLDDMRHLILKTSM-HSYELYGISFLLKSCPGLDMLTID 362

Query: 409 LNTSARIF 432
           L   ARIF
Sbjct: 363 LG-PARIF 369


>ref|XP_002319292.1| predicted protein [Populus trichocarpa] gi|222857668|gb|EEE95215.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/128 (42%), Positives = 76/128 (59%)
 Frame = +1

Query: 52  VDAPGLKLFTYSGVMAGFSFGSLNLDMEASLDFGLQKEYGWYGEDLYHILNEIGGVKTLT 231
           ++ P  + F YSG +  F   +    +EA LDFG+Q E+   G  LY +L E+   + LT
Sbjct: 240 IEGPRFQFFKYSGKVGQFLLENQRDMVEAELDFGMQTEFEEVGAFLYDLLQELFAARILT 299

Query: 232 VCPYMLQVICTWEEPFGLLPALERLKHLILKASLINRDEFYGITFFLSSCPNLEILTIDL 411
           VC   LQ+I + +EP GL   L+ ++ LILK +L + +E+ GI F L S P LE LTID+
Sbjct: 300 VCSVFLQIIPSGDEPLGLQAPLD-VRKLILKTAL-HSNEYCGIKFMLRSSPRLETLTIDI 357

Query: 412 NTSARIFP 435
              ARIFP
Sbjct: 358 G-PARIFP 364


>ref|XP_002894644.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340486|gb|EFH70903.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
 Frame = +1

Query: 31  SSMLDFRVDAPGLKLFTYSGVMAGFSFGSLNLDM-EASLDFGLQKEYG-------WYGED 186
           SS +    D P +++F YSG +  F    +N+ + +  LDF  + EY          G  
Sbjct: 235 SSFMACSFDLPNVEIFKYSGQILSFDVKRMNMSIKDVYLDFTAEGEYDKRNQRTKLEGSV 294

Query: 187 LYHILNEIGGVKTLTVCPYMLQVICTWEEPFGLLPALERLKHLILKASLINRDEFYGITF 366
           L   LN + G +TL+VCPY+LQ I   E+P  LL  +E  +HL+L+  L +  EF GI  
Sbjct: 295 LSAFLNNLRGARTLSVCPYLLQTIQECEDPLDLLRPME-TQHLVLRTRL-HVTEFKGIRL 352

Query: 367 FLSSCPNLEILTIDL 411
            L +CPNLE+LT D+
Sbjct: 353 LLDNCPNLEMLTFDI 367


>ref|NP_176035.1| F-box protein [Arabidopsis thaliana]
           gi|75268371|sp|Q9C7X8.1|FBL33_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At1g56400
           gi|12323022|gb|AAG51499.1|AC058785_2 hypothetical
           protein [Arabidopsis thaliana]
           gi|332195266|gb|AEE33387.1| F-box protein [Arabidopsis
           thaliana]
          Length = 479

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
 Frame = +1

Query: 31  SSMLDFRVDAPGLKLFTYSGVMAGFSFGSLNLDM-EASLDFGLQKEYG-------WYGED 186
           SS +    D P +++F YSG +  F    +N+ + +  LDF  +  Y          G  
Sbjct: 235 SSFMVCCFDLPNVEIFKYSGQILSFDVKRMNMSIKDVILDFTAEGLYEDRNQRTKLEGSV 294

Query: 187 LYHILNEIGGVKTLTVCPYMLQVICTWEEPFGLLPALERLKHLILKASLINRDEFYGITF 366
           L   LN + G +TL+VCPY+LQ I   E+PF LL  +E  +HL+L+  L +  EF GI  
Sbjct: 295 LSAFLNNLRGARTLSVCPYLLQTIQECEDPFDLLRPME-TQHLVLRTRL-HVMEFKGIKL 352

Query: 367 FLSSCPNLEILTIDL 411
            L +CPNLE LT D+
Sbjct: 353 LLDNCPNLETLTFDI 367


>ref|NP_001185249.1| F-box protein [Arabidopsis thaliana] gi|332195267|gb|AEE33388.1|
           F-box protein [Arabidopsis thaliana]
          Length = 438

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
 Frame = +1

Query: 31  SSMLDFRVDAPGLKLFTYSGVMAGFSFGSLNLDM-EASLDFGLQKEYG-------WYGED 186
           SS +    D P +++F YSG +  F    +N+ + +  LDF  +  Y          G  
Sbjct: 194 SSFMVCCFDLPNVEIFKYSGQILSFDVKRMNMSIKDVILDFTAEGLYEDRNQRTKLEGSV 253

Query: 187 LYHILNEIGGVKTLTVCPYMLQVICTWEEPFGLLPALERLKHLILKASLINRDEFYGITF 366
           L   LN + G +TL+VCPY+LQ I   E+PF LL  +E  +HL+L+  L +  EF GI  
Sbjct: 254 LSAFLNNLRGARTLSVCPYLLQTIQECEDPFDLLRPME-TQHLVLRTRL-HVMEFKGIKL 311

Query: 367 FLSSCPNLEILTIDL 411
            L +CPNLE LT D+
Sbjct: 312 LLDNCPNLETLTFDI 326