BLASTX nr result

ID: Cephaelis21_contig00039947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039947
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200293.1| putative F-box/LRR-repeat protein [Arabidopsis ...    82   6e-14
ref|XP_002864357.1| hypothetical protein ARALYDRAFT_331822 [Arab...    79   5e-13
ref|XP_004149512.1| PREDICTED: F-box protein At3g62230-like [Cuc...    75   4e-12
ref|NP_176035.1| F-box protein [Arabidopsis thaliana] gi|7526837...    69   3e-10
gb|AAG12672.1|AC027033_7 hypothetical protein; 40655-42260 [Arab...    69   4e-10

>ref|NP_200293.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262400|sp|Q9FFU7.1|FBL90_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At5g54820
           gi|9758262|dbj|BAB08761.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009161|gb|AED96544.1|
           putative F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 472

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -3

Query: 301 EDRLSSLPDELLFIIISFLPFKEAVRTAILSKRWRFIPLGTRNLEFKESDLVR---TRAY 131
           +DRLSSLPD LL +IISFLP KE VRT++LSKRWR++ L T NL FKESD V    T A 
Sbjct: 6   QDRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESDYVNPDITDAE 65

Query: 130 GMNGCERRRFINFVLRWINGSFTDKSGANKFLLSFSH 20
                  R F   V +W+  S T       F + FSH
Sbjct: 66  YSRIVAYRSFFCSVDKWV--SITQHQVVESFEICFSH 100


>ref|XP_002864357.1| hypothetical protein ARALYDRAFT_331822 [Arabidopsis lyrata subsp.
           lyrata] gi|297310192|gb|EFH40616.1| hypothetical protein
           ARALYDRAFT_331822 [Arabidopsis lyrata subsp. lyrata]
          Length = 476

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = -3

Query: 301 EDRLSSLPDELLFIIISFLPFKEAVRTAILSKRWRFIPLGTRNLEFKESDLVRTRAYG-- 128
           +DRLSSLPD LL +IISFLPFKE VRT+ LS+RWR++   TRNL F+ESD V     G  
Sbjct: 6   QDRLSSLPDVLLIVIISFLPFKECVRTSALSRRWRYLCQETRNLSFRESDFVSPYITGEY 65

Query: 127 MNGCERRRFINFVLRWINGSFTDKSGANKFLLSFSHPKDF 8
                   F +F   W+  S         F + FS+P  F
Sbjct: 66  SRFAACASFFSFADNWL--SRIQDQVVESFEICFSNPVGF 103


>ref|XP_004149512.1| PREDICTED: F-box protein At3g62230-like [Cucumis sativus]
           gi|449523535|ref|XP_004168779.1| PREDICTED: F-box
           protein At3g62230-like [Cucumis sativus]
          Length = 402

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = -3

Query: 301 EDRLSSLPDELLFIIISFLPFKEAVRTAILSKRWRFIPLGTRNLEFKESDLVRTRAYGMN 122
           ED+   LPD LL II+S LPFKEAVRT+ILSKRW  I   T+N+E  E   V+   Y   
Sbjct: 4   EDKFDVLPDALLSIIVSSLPFKEAVRTSILSKRWMKIWQATKNIELHECFFVQRDDYSDQ 63

Query: 121 ---GCERRRFINFVLRWINGSFTDKSGANKFLLSFSHP 17
                +RR FI+FV  +I      +S  +KF LS S+P
Sbjct: 64  QTIDAQRRAFIDFVTNFIR--IYQESSVSKFCLSVSNP 99


>ref|NP_176035.1| F-box protein [Arabidopsis thaliana]
           gi|75268371|sp|Q9C7X8.1|FBL33_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At1g56400
           gi|12323022|gb|AAG51499.1|AC058785_2 hypothetical
           protein [Arabidopsis thaliana]
           gi|332195266|gb|AEE33387.1| F-box protein [Arabidopsis
           thaliana]
          Length = 479

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = -3

Query: 301 EDRLSSLPDELLFIIISFLPFKEAVRTAILSKRWRFIPLGTRNLEFKESDLVRTRAYGMN 122
           +DRLS+LPD LL +IIS L FKE +RT++L+KRWR++   TRN+ FKE++ V        
Sbjct: 12  QDRLSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYLCRETRNISFKETEYV-DHFVSDK 70

Query: 121 GCERRRFINFVLRWI---NGSFTDKSGANKFLLSFSHPKDFL 5
             +R  F  ++ +W+   +G + +        + FS P DFL
Sbjct: 71  RSKRVSFAAYMCQWVSRYHGRYIE-----TLEIYFSIPSDFL 107


>gb|AAG12672.1|AC027033_7 hypothetical protein; 40655-42260 [Arabidopsis thaliana]
          Length = 392

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -3

Query: 298 DRLSSLPDELLFIIISFLPFKEAVRTAILSKRWRFIPLGTRNLEFKESDLVRTRAYGMNG 119
           DR+SSLPD +L +I+SFL FK+ V+T+ILSKRWR I    +N+ FKES+ V    +    
Sbjct: 8   DRISSLPDVVLVMILSFLSFKDNVKTSILSKRWRNICYEAKNISFKESEYVDISVFDYVS 67

Query: 118 CERRRFINFVLRWIN 74
            +R  F+ ++L W++
Sbjct: 68  -KRVSFVRYMLNWVS 81


Top