BLASTX nr result

ID: Cephaelis21_contig00039945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039945
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    57   6e-06
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    57   6e-06

>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
 Frame = +1

Query: 457 FAAALFGVRLAQNLNLTNCTLEMDSKLIVDMITGDASWPWEHHVKLYQLRQILTTLDFQI 636
           F A +  +  AQ + L +  LE DS  +V+        PW+   +         ++    
Sbjct: 107 FCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSC 166

Query: 637 IHVFRESNSVADSLSRIASNQGISISFTA--NTLHPYIRGLIALDRINFPYFR 789
           +H+ RE N VAD+L++    QG+S+ +T    +  P+I  L+  DR+  PY R
Sbjct: 167 VHILREGNMVADALAK--HGQGLSLYYTQLWTSPPPFIYHLLLRDRLGLPYTR 217


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +1

Query: 439  TIRWFIFAAALFGVRLAQNLNLTNCTLEMDSKLIVDMITGDASWPWEHHVKLYQLRQILT 618
            T  W    + L G++L     +     E DS L+   IT + S PW  ++ + ++++++ 
Sbjct: 1038 TSSWAEAMSMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVE 1097

Query: 619  TLDFQIIHVFRESNSVADSLSRIASNQGISISFTA-NTLHPYIRGLIALDRINFPYFR 789
               F I H  RE+N  AD L+ I+ +  ++  F +   L   ++GL+ LDR+N P FR
Sbjct: 1098 EHGFIINHCLREANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


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