BLASTX nr result
ID: Cephaelis21_contig00039941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00039941
(334 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 157 8e-37
emb|CBI30729.3| unnamed protein product [Vitis vinifera] 157 8e-37
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar... 151 6e-35
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ... 149 2e-34
ref|XP_002519323.1| pentatricopeptide repeat-containing protein,... 127 7e-28
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 157 bits (397), Expect = 8e-37
Identities = 71/111 (63%), Positives = 95/111 (85%)
Frame = -1
Query: 334 VTLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATAR 155
V++LS+CA +G+L+QG+W HAYID+NGI I+GF+ATALV Y+KCG IEKALEVF++ R
Sbjct: 275 VSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLR 334
Query: 154 KDVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPNEVTFISLLSACSHA 2
KD+STWN++I+G S+HG G+ A+Q+FSEM+ FKPNEVTF+ +LSACS A
Sbjct: 335 KDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRA 385
Score = 62.0 bits (149), Expect = 5e-08
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = -1
Query: 325 LSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATARKDV 146
L SC + +G+ H ++ + G+ + F+ L+ YA CGCIE A + D +DV
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDV 174
Query: 145 STWNAMIAG*SSHGHGRQAIQVFSEMVSND 56
+WNA+++ + G A +F EM +
Sbjct: 175 VSWNALLSAYAERGLMELACHLFDEMTERN 204
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = -1
Query: 223 LVATYAKCGCIEKALEVFDATARKDVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPN 44
+++ Y G +E+A VF T K+V +WNAMI G S G + + +F +M KP+
Sbjct: 211 MISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 270
Query: 43 EVTFISLLSACSH 5
T +S+LSAC+H
Sbjct: 271 NCTLVSVLSACAH 283
>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 157 bits (397), Expect = 8e-37
Identities = 71/111 (63%), Positives = 95/111 (85%)
Frame = -1
Query: 334 VTLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATAR 155
V++LS+CA +G+L+QG+W HAYID+NGI I+GF+ATALV Y+KCG IEKALEVF++ R
Sbjct: 245 VSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLR 304
Query: 154 KDVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPNEVTFISLLSACSHA 2
KD+STWN++I+G S+HG G+ A+Q+FSEM+ FKPNEVTF+ +LSACS A
Sbjct: 305 KDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRA 355
Score = 68.6 bits (166), Expect = 5e-10
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 32/139 (23%)
Frame = -1
Query: 325 LSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKA------------ 182
L SC + +G+ H ++ + G+ + F+ L+ YA CGCIE A
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDV 174
Query: 181 --------------------LEVFDATARKDVSTWNAMIAG*SSHGHGRQAIQVFSEMVS 62
VF T K+V +WNAMI G S G + + +F +M
Sbjct: 175 VSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQH 234
Query: 61 NDFKPNEVTFISLLSACSH 5
KP+ T +S+LSAC+H
Sbjct: 235 AGVKPDNCTLVSVLSACAH 253
>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18840 gi|5738365|emb|CAA16741.2| putative protein
[Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 151 bits (381), Expect = 6e-35
Identities = 69/110 (62%), Positives = 92/110 (83%)
Frame = -1
Query: 334 VTLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATAR 155
V++LS+CA +GSL+QG+W H YID++GIEI GFLATALV Y+KCG I+KALEVF AT++
Sbjct: 308 VSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK 367
Query: 154 KDVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPNEVTFISLLSACSH 5
+DVSTWN++I+ S HG G+ A+++FSEMV FKPN +TFI +LSAC+H
Sbjct: 368 RDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Score = 56.2 bits (134), Expect = 3e-06
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = -1
Query: 331 TLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATARK 152
+LLS+ G + + + ++ +E F+ ++ YA G +++A EVFD+ +
Sbjct: 211 SLLSAYLEKGLVDEARALFDEMEERNVESWNFM----ISGYAAAGLVKEAKEVFDSMPVR 266
Query: 151 DVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDF-KPNEVTFISLLSACS 8
DV +WNAM+ + G + ++VF++M+ + KP+ T +S+LSAC+
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA 315
>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313808|gb|EFH44231.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 535
Score = 149 bits (377), Expect = 2e-34
Identities = 68/110 (61%), Positives = 90/110 (81%)
Frame = -1
Query: 334 VTLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATAR 155
V +LS+CA +GSL+QG+W H YID++GIEI GF+ATALV Y+KCG I+KALEVF T++
Sbjct: 278 VNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSK 337
Query: 154 KDVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPNEVTFISLLSACSH 5
+DVSTWN++I G S HG G+ A+++FSEMV FKPN +TFI +LSAC+H
Sbjct: 338 RDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 387
>ref|XP_002519323.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541638|gb|EEF43187.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 396
Score = 127 bits (320), Expect = 7e-28
Identities = 56/110 (50%), Positives = 77/110 (70%)
Frame = -1
Query: 331 TLLSSCAGIGSLTQGKWFHAYIDRNGIEINGFLATALVATYAKCGCIEKALEVFDATARK 152
T+LS+C G+G+L QGKW H YI++ GIE + LATA++ Y KCG +EKALEVF K
Sbjct: 281 TMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKALEVFKGLPHK 340
Query: 151 DVSTWNAMIAG*SSHGHGRQAIQVFSEMVSNDFKPNEVTFISLLSACSHA 2
+S+WN MI G + HG G AI++F EM P+ +TF++LLSAC+H+
Sbjct: 341 GISSWNCMIGGLAMHGKGEAAIELFKEMEKEMLAPDRITFVNLLSACAHS 390