BLASTX nr result

ID: Cephaelis21_contig00039849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039849
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...    88   8e-16
emb|CBI34863.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...    82   3e-14
gb|AAX55199.1| hypothetical protein At5g40480 [Arabidopsis thali...    82   6e-14
dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]       82   6e-14

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/77 (53%), Positives = 54/77 (70%)
 Frame = +1

Query: 1    GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180
            G+C ++ +VNDSR+V + QPP  L+CLQL++ P+ LG ALVTVYDIG             
Sbjct: 1060 GSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQV 1119

Query: 181  XDIDWIKITSGEEISVM 231
             D+DWI+ITSGEEIS+M
Sbjct: 1120 ADVDWIRITSGEEISLM 1136


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/77 (53%), Positives = 54/77 (70%)
 Frame = +1

Query: 1    GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180
            G+C ++ +VNDSR+V + QPP  L+CLQL++ P+ LG ALVTVYDIG             
Sbjct: 985  GSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQV 1044

Query: 181  XDIDWIKITSGEEISVM 231
             D+DWI+ITSGEEIS+M
Sbjct: 1045 ADVDWIRITSGEEISLM 1061


>ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
            gi|297316537|gb|EFH46960.1| EMB3012 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1918

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/77 (48%), Positives = 51/77 (66%)
 Frame = +1

Query: 1    GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180
            G+C+ E +VN+SR+ ++ +PP  L+C Q+ML P+ LG  LVTVYDIG             
Sbjct: 969  GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTLVTVYDIGVSPPLSALALIKV 1028

Query: 181  XDIDWIKITSGEEISVM 231
             D+DWIKI SG+EIS+M
Sbjct: 1029 ADVDWIKIASGDEISIM 1045


>gb|AAX55199.1| hypothetical protein At5g40480 [Arabidopsis thaliana]
          Length = 378

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +1

Query: 1   GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180
           G+C+ E +VN+SR+ ++ +PP  L+C Q+ML P+ LG  +VTVYDIG             
Sbjct: 278 GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGVSPPLSALALIKV 337

Query: 181 XDIDWIKITSGEEISVM 231
            D+DWIKI SG+EIS+M
Sbjct: 338 ADVDWIKIASGDEISIM 354


>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/77 (46%), Positives = 51/77 (66%)
 Frame = +1

Query: 1    GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180
            G+C+ E +VN+SR+ ++ +PP  L+C Q+ML P+ LG  +VTVYDIG             
Sbjct: 985  GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGVSPPLSALALIKV 1044

Query: 181  XDIDWIKITSGEEISVM 231
             D+DWIKI SG+EIS+M
Sbjct: 1045 ADVDWIKIASGDEISIM 1061


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