BLASTX nr result
ID: Cephaelis21_contig00039849
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00039849 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 88 8e-16 emb|CBI34863.3| unnamed protein product [Vitis vinifera] 88 8e-16 ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g... 82 3e-14 gb|AAX55199.1| hypothetical protein At5g40480 [Arabidopsis thali... 82 6e-14 dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana] 82 6e-14 >ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis vinifera] Length = 2363 Score = 87.8 bits (216), Expect = 8e-16 Identities = 41/77 (53%), Positives = 54/77 (70%) Frame = +1 Query: 1 GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180 G+C ++ +VNDSR+V + QPP L+CLQL++ P+ LG ALVTVYDIG Sbjct: 1060 GSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQV 1119 Query: 181 XDIDWIKITSGEEISVM 231 D+DWI+ITSGEEIS+M Sbjct: 1120 ADVDWIRITSGEEISLM 1136 >emb|CBI34863.3| unnamed protein product [Vitis vinifera] Length = 1961 Score = 87.8 bits (216), Expect = 8e-16 Identities = 41/77 (53%), Positives = 54/77 (70%) Frame = +1 Query: 1 GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180 G+C ++ +VNDSR+V + QPP L+CLQL++ P+ LG ALVTVYDIG Sbjct: 985 GSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQV 1044 Query: 181 XDIDWIKITSGEEISVM 231 D+DWI+ITSGEEIS+M Sbjct: 1045 ADVDWIRITSGEEISLM 1061 >ref|XP_002870701.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] gi|297316537|gb|EFH46960.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] Length = 1918 Score = 82.4 bits (202), Expect = 3e-14 Identities = 37/77 (48%), Positives = 51/77 (66%) Frame = +1 Query: 1 GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180 G+C+ E +VN+SR+ ++ +PP L+C Q+ML P+ LG LVTVYDIG Sbjct: 969 GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTLVTVYDIGVSPPLSALALIKV 1028 Query: 181 XDIDWIKITSGEEISVM 231 D+DWIKI SG+EIS+M Sbjct: 1029 ADVDWIKIASGDEISIM 1045 >gb|AAX55199.1| hypothetical protein At5g40480 [Arabidopsis thaliana] Length = 378 Score = 81.6 bits (200), Expect = 6e-14 Identities = 36/77 (46%), Positives = 51/77 (66%) Frame = +1 Query: 1 GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180 G+C+ E +VN+SR+ ++ +PP L+C Q+ML P+ LG +VTVYDIG Sbjct: 278 GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGVSPPLSALALIKV 337 Query: 181 XDIDWIKITSGEEISVM 231 D+DWIKI SG+EIS+M Sbjct: 338 ADVDWIKIASGDEISIM 354 >dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana] Length = 1962 Score = 81.6 bits (200), Expect = 6e-14 Identities = 36/77 (46%), Positives = 51/77 (66%) Frame = +1 Query: 1 GTCIMENLVNDSRIVKIFQPPQELKCLQLMLDPERLGMALVTVYDIGXXXXXXXXXXXXX 180 G+C+ E +VN+SR+ ++ +PP L+C Q+ML P+ LG +VTVYDIG Sbjct: 985 GSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGVSPPLSALALIKV 1044 Query: 181 XDIDWIKITSGEEISVM 231 D+DWIKI SG+EIS+M Sbjct: 1045 ADVDWIKIASGDEISIM 1061