BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039799
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   107   1e-21
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   105   7e-21
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...   104   9e-21
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   101   7e-20
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   101   1e-19

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = +3

Query: 12   SRRHCRMISHITDINIGKLPMRYLGNTLYNGRKKCVYFQNLIDQVAAKITGWKSRFLTTA 191
            SR   ++IS  + I   K   +YLG  +   R     F  ++++V+A++ GWK R L+ A
Sbjct: 591  SREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLA 650

Query: 192  GRLILIKHVLNSIPLHVLAALDPPTTILQQLERMFSKFFWGSTADQNHRIWRAWDKVCYP 371
            GR+ L K VL+SIP+HV++A+  P + L  L+R    F WGST ++  +   +W K+C P
Sbjct: 651  GRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKP 710

Query: 372  EIENGLGV*SLKKLTKAYACKLWWKWRTGK-GLWAKYVQ 485
            + E G+G+ S + + KA   K+ W+    K  LWA+ V+
Sbjct: 711  KAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVR 749


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  105 bits (261), Expect = 7e-21
 Identities = 51/152 (33%), Positives = 82/152 (53%)
 Frame = +3

Query: 33  ISHITDINIGKLPMRYLGNTLYNGRKKCVYFQNLIDQVAAKITGWKSRFLTTAGRLILIK 212
           I +I   N+G LP  YLG  ++ G+ K ++FQ + D+V AK+  WK+  L+ AGR+ L+K
Sbjct: 481 IVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVK 540

Query: 213 HVLNSIPLHVLAALDPPTTILQQLERMFSKFFWGSTADQNHRIWRAWDKVCYPEIENGLG 392
            V+ S+ +H ++    P  IL+++E+    F W     +   +  AW K+C    E GLG
Sbjct: 541 SVVQSMLVHTMSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEGGLG 600

Query: 393 V*SLKKLTKAYACKLWWKWRTGKGLWAKYVQS 488
           V SL  L +A   K+ W        WA  +++
Sbjct: 601 VKSLICLNEATNLKICWNLMQSDEQWANIIRN 632


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score =  104 bits (260), Expect = 9e-21
 Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
 Frame = +3

Query: 36   SHITDINIGKLPMRYLGNTLYNGRKKCVYFQNLIDQVAAKITGWKSRFLTTAGRLILIKH 215
            S + +   G +P  YLG  +    +K  +++ +I+ + A+++ W ++FL+  GRL+L+K 
Sbjct: 1276 SMVMNCRRGSIPFVYLGLPIGGDSRKLSFWKPVINCIVARLSSWNNKFLSFGGRLVLLKF 1335

Query: 216  VLNSIPLHVLAALDPPTTILQQLERMFSKFFWGSTADQNHRIWRAWDKVCYPEIENGLGV 395
            VL+S+P++ L+    P  I+  +E +F +FFWG + D N   W  WD +C P+ + GLGV
Sbjct: 1336 VLSSLPVYFLSFFKAPAGIISLIESIFKRFFWGGSEDNNKISWIKWDDICVPKEDGGLGV 1395

Query: 396  *SLKKLTKAYACKLWWKWRTGK-GLW 470
              L++   +   K  W+    K GLW
Sbjct: 1396 RRLREFNFSLLGKWCWRMLVDKEGLW 1421


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  101 bits (252), Expect = 7e-20
 Identities = 46/139 (33%), Positives = 77/139 (55%)
 Frame = +3

Query: 27  RMISHITDINIGKLPMRYLGNTLYNGRKKCVYFQNLIDQVAAKITGWKSRFLTTAGRLIL 206
           + + ++   N G  P  YLG  ++ G+ K  + Q ++D++  K++ WK+  L+ AGR+ L
Sbjct: 385 QQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASILSIAGRVQL 444

Query: 207 IKHVLNSIPLHVLAALDPPTTILQQLERMFSKFFWGSTADQNHRIWRAWDKVCYPEIENG 386
           IK V  S+ +H +   D P+ +L++LE  F  F W     +   +  AW K+C P+ + G
Sbjct: 445 IKSVAQSMLIHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGG 504

Query: 387 LGV*SLKKLTKAYACKLWW 443
           LG+ SL +L  A   KL W
Sbjct: 505 LGIRSLSQLNAAGNLKLCW 523


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/138 (34%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +3

Query: 75  RYLGNTLYNGRKKCVYFQNLIDQVAAKITGWKSRFLTTAGRLILIKHVLNSIPLHVLAAL 254
           +YLG  +   R     F  ++++V+++++GWKSR L+ AGR+ L K VL SIP+H ++++
Sbjct: 547 KYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSI 606

Query: 255 DPPTTILQQLERMFSKFFWGSTADQNHRIWRAWDKVCYPEIENGLGV*SLKKLTKAYACK 434
             P ++L+QL+++   F WGST ++  +   +W KVC P+   GLG+ + K + +A   K
Sbjct: 607 LLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAK 666

Query: 435 LWWKWRTGK-GLWAKYVQ 485
           + W+    K  LWA+ ++
Sbjct: 667 VGWRLLNDKVSLWARVLR 684