BLASTX nr result

ID: Cephaelis21_contig00039781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039781
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    67   2e-09

>ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = +1

Query: 1   GRLVKMNHYSPAFSLYRNMCVQGIRVNDYTMNTMINCYCLVGRVNLGFSLLGAFFKRGLV 180
           G LVKM HY  A SL++ M V+GI  + +T+N +INC+C +G++   F++LG   K G  
Sbjct: 18  GSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQ 77

Query: 181 PNVITFGT 204
           PN IT  T
Sbjct: 78  PNTITLNT 85


>ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
           gi|449492643|ref|XP_004159059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = +1

Query: 1   GRLVKMNHYSPAFSLYRNMCVQGIRVNDYTMNTMINCYCLVGRVNLGFSLLGAFFKRGLV 180
           G L K+ HYS  FSLY+ M + G+  N +T+N +INC C V RV  G S +    +RG +
Sbjct: 99  GALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYI 158

Query: 181 PNVITF 198
           P+V+T+
Sbjct: 159 PDVVTY 164


>ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = +1

Query: 1   GRLVKMNHYSPAFSLYRNMCVQGIRVNDYTMNTMINCYCLVGRVNLGFSLLGAFFKRGLV 180
           G L KM HYS A SL + M V+GI  N  T+N +INC+C +G+++  FS+LG   K G  
Sbjct: 60  GYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQ 119

Query: 181 PNVITFGT 204
           PN IT  T
Sbjct: 120 PNTITLTT 127


>ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/68 (48%), Positives = 42/68 (61%)
 Frame = +1

Query: 1   GRLVKMNHYSPAFSLYRNMCVQGIRVNDYTMNTMINCYCLVGRVNLGFSLLGAFFKRGLV 180
           G LVKM HY  A SL R M V+GI  N  T+N +INC+C +G++   FS+LG   K G  
Sbjct: 73  GYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQ 132

Query: 181 PNVITFGT 204
           P+ IT  T
Sbjct: 133 PDTITLNT 140


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +1

Query: 7   LVKMNHYSPAFSLYRNMCVQGIRVNDYTMNTMINCYCLVGRVNLGFSLLGAFFKRGLVPN 186
           LV+M HY    S+YR M   G+  + YT+  +INC C +  V LGFS+LG  FK G  P+
Sbjct: 114 LVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPS 173

Query: 187 VITFGT 204
           +ITF T
Sbjct: 174 IITFNT 179


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