BLASTX nr result

ID: Cephaelis21_contig00039769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039769
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medica...   102   3e-20
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    99   4e-19
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...    97   1e-18
ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808...    96   3e-18

>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/95 (58%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -2

Query: 283 AEADMQQLSHALKILSEAEKQLRMSKNQTTWLTVALLQLSSV-GSSLEINESRLCGKTIQ 107
           +E DMQ+LSHALKILSE+EKQLRMSKNQ+TWLTVALLQLSS+  S +++N+S+   +   
Sbjct: 600 SEGDMQRLSHALKILSESEKQLRMSKNQSTWLTVALLQLSSLEASPMDVNDSKSSMRNGH 659

Query: 106 PSDGEFYSTSSTSESLKHLVSCTCNGNYSCKMGMQ 2
             DG+F ST ST ESLKHLV  +C    S ++ +Q
Sbjct: 660 DRDGDFSSTPSTGESLKHLVLHSCEDRKSERLQVQ 694


>ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355509967|gb|AES91109.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 936

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = -2

Query: 286 IAEADMQQLSHALKILSEAEKQLRMSKNQTTWLTVALLQLSSVG-SSLEINESRLCGKTI 110
           +AE+ MQ+LSHAL+ILSE EKQLR+SKNQTTW T ALLQLSS+  SS++ N+S+LC +  
Sbjct: 588 LAESSMQKLSHALRILSETEKQLRISKNQTTWFTAALLQLSSLEYSSVDANDSKLCIRAA 647

Query: 109 QPSDGEFYSTSSTSESLKHLVSCTC 35
              DG+  STSST+ESLKHL +  C
Sbjct: 648 SNRDGDLCSTSSTAESLKHLATGKC 672


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -2

Query: 280 EADMQQLSHALKILSEAEKQLRMSKNQTTWLTVALLQLSSVGSS-LEINESRLCGKTIQP 104
           EADMQ+LSHALK+LSE EKQLRMSK+Q+TWLTVALLQLSS+ +  L  N+     +  Q 
Sbjct: 603 EADMQRLSHALKVLSETEKQLRMSKSQSTWLTVALLQLSSLEAPFLNANDPNPSIRNAQD 662

Query: 103 SDGEFYSTSSTSESLKHLVSCTC 35
            DG+F STSST ESLK L+ C+C
Sbjct: 663 RDGDFCSTSSTGESLKLLLPCSC 685


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
 Frame = -2

Query: 283 AEADMQQLSHALKILSEAEKQLRMSKNQTTWLTVALLQLSSVG-SSLEINESRLCGKTIQ 107
           +EADMQ+LSHAL+ILSE EKQLR+SKNQTTW T ALLQLSSV  SS++ N+++LC + + 
Sbjct: 600 SEADMQKLSHALRILSETEKQLRISKNQTTWFTAALLQLSSVEYSSVDTNDAKLCARAVS 659

Query: 106 PSDGEFYSTSSTSESLKHLVSC-TCNGN-YSCKMGMQ 2
             DG+  ST    +SL+HL +   C+   Y+  +G+Q
Sbjct: 660 NGDGDICSTPPKGDSLEHLATTGQCDDKPYTLGLGVQ 696


>ref|XP_003549834.1| PREDICTED: uncharacterized protein LOC100808544 [Glycine max]
          Length = 976

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/102 (51%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
 Frame = -2

Query: 340 ILDASYDISFSEEVLFCA--IAEADMQQLSHALKILSEAEKQLRMSKNQTTWLTVALLQL 167
           IL   +++  SE   FC    +EAD+Q+LS AL+ILSE EKQLR+SKNQTTW T ALLQL
Sbjct: 578 ILAGKFELGDSEIRRFCNRYTSEADLQKLSRALRILSETEKQLRISKNQTTWFTAALLQL 637

Query: 166 SSVG-SSLEINESRLCGKTIQPSDGEFYSTSSTSESLKHLVS 44
           SSV  SS + N+++LC ++    DG+  STS   +SL+HL +
Sbjct: 638 SSVEYSSADTNDTKLCARSASNRDGDICSTSPKGDSLEHLAT 679


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