BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039751
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    94   2e-17
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     93   2e-17
emb|CAN81028.1| hypothetical protein VITISV_020534 [Vitis vinifera]    75   4e-12
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            75   6e-12
emb|CAN65312.1| hypothetical protein VITISV_002752 [Vitis vinifera]    72   5e-11

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 VIKVNLKEVFVINP*KYC-HIEDTNIE*IVDSRAYYHCDLRREYLSTYKI*DFDTIKIGN 149
           +++ N   V  IN  + C H+     E +VD+ A +H    R+    Y   DF T+K+GN
Sbjct: 267 MVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGN 326

Query: 148 TSVSQIVEIGDICIKTSVGCTLTLKDVRHILNLHLNLISARTLNNKGYK 2
           TS S+I  IGDICIKT+VGCTL LKDVRH+ +L +NLIS   L+  GY+
Sbjct: 327 TSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYE 375


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 VIKVNLKEVFVINP*KYC-HIEDTNIE*IVDSRAYYHCDLRREYLSTYKI*DFDTIKIGN 149
           +++ N   V +IN  + C H+  T  E +VD+ A YH    R+    Y   D+  +K+GN
Sbjct: 268 MVQNNDDVVLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGN 327

Query: 148 TSVSQIVEIGDICIKTSVGCTLTLKDVRHILNLHLNLISARTLNNKGYK 2
           TS S+I  IGDIC KT+VGCTL LKDVRH+ +L +NLIS   L+  GY+
Sbjct: 328 TSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGIALDQDGYE 376


>emb|CAN81028.1| hypothetical protein VITISV_020534 [Vitis vinifera]
          Length = 198

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%)
 Frame = -3

Query: 268 IEDTNIE*IVDSRAYYHCDLRREYLSTYKI*DFDTIKIGNTSVSQIVEIGDICIKTSVGC 89
           ++D +   +VD+   +H   RR++ S+Y    F  +++GN    +IV +GD+ ++TS+GC
Sbjct: 87  LDDEDSTWVVDTTMPFHIIARRDFFSSYTSGSFGWVRMGNEVKCEIVGMGDVELETSIGC 146

Query: 88  TLTLKDVRHILNLHLNLISARTLNNKGY 5
            L LKDVRH+L +H +LIS   L+++GY
Sbjct: 147 KLVLKDVRHVLEMHFSLISIGKLDDEGY 174


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = -3

Query: 244 IVDSRAYYHCDLRREYLSTYKI*DFDTIKIGNTSVSQIVEIGDICIKTSVGCTLTLKDVR 65
           ++DS A  H   RRE  S+Y + DF  +K+GN + S +V  GD+C++T  G  L L+DVR
Sbjct: 293 VIDSGATIHATPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLLLRDVR 352

Query: 64  HILNLHLNLISARTLNNKGY 5
           H+ ++ LNLIS   L+ +GY
Sbjct: 353 HVPDMRLNLISVDKLDEEGY 372


>emb|CAN65312.1| hypothetical protein VITISV_002752 [Vitis vinifera]
          Length = 1057

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/130 (28%), Positives = 70/130 (53%)
 Frame = -3

Query: 394 IIDLAVSVVNGGFRIFLNSEVRLVIKVNLKEVFVINP*KYCHIEDTNIE*IVDSRAYYHC 215
           ++ L+ S  NG   +++  +  +V   +  +  ++      ++   N   +VD    +H 
Sbjct: 571 VVSLSNSAPNGVINVYMKDDKDIVAVASNGDTIIVCDDMCVNLACQNSTWVVDIVVSFHI 630

Query: 214 DLRREYLSTYKI*DFDTIKIGNTSVSQIVEIGDICIKTSVGCTLTLKDVRHILNLHLNLI 35
             RR++  +Y    F  +K+GN +  +IV +GD+ ++TS+   L LKDVRH L +H +LI
Sbjct: 631 TTRRDFFLSYXSGSFGWVKMGNEAKCKIVGMGDVELETSIXYKLVLKDVRHXLEMHFSLI 690

Query: 34  SARTLNNKGY 5
           S   L+++GY
Sbjct: 691 SVGKLDDEGY 700