BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039698
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar...   103   1e-20
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...    99   3e-19
ref|XP_002521565.1| pentatricopeptide repeat-containing protein,...    90   2e-16

>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           YTFTF LK+C S   ++ G+QIHG V+K GL  D++I NTL+H+YA CGC + AR LLDR
Sbjct: 109 YTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR 168

Query: 58  LPTKDVVSWNAVLSVYVE 5
           +  +DVVSWNA+LS Y E
Sbjct: 169 MLERDVVSWNALLSAYAE 186



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/73 (32%), Positives = 44/73 (60%)
 Frame = -3

Query: 235 TFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDRL 56
           T   +L ACA + ++  G+ +H  + KNG+S D ++   L+ MY+KCG  + A  + +  
Sbjct: 273 TLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC 332

Query: 55  PTKDVVSWNAVLS 17
             KD+ +WN+++S
Sbjct: 333 LRKDISTWNSIIS 345


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           YTFTF LK+C S   ++ G+QIHG V+K GL  D++I NTL+H+YA CGC + AR LLDR
Sbjct: 109 YTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR 168

Query: 58  LPTKDVVSWNAVLSVYVE 5
           +  +DVVSWNA+LS Y E
Sbjct: 169 MLERDVVSWNALLSAYAE 186



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/73 (32%), Positives = 44/73 (60%)
 Frame = -3

Query: 235 TFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDRL 56
           T   +L ACA + ++  G+ +H  + KNG+S D ++   L+ MY+KCG  + A  + +  
Sbjct: 243 TLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC 302

Query: 55  PTKDVVSWNAVLS 17
             KD+ +WN+++S
Sbjct: 303 LRKDISTWNSIIS 315


>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098703|sp|O49399.2|PP321_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18840 gi|5738365|emb|CAA16741.2| putative protein
           [Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
           putative protein [Arabidopsis thaliana]
           gi|332658697|gb|AEE84097.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 545

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/78 (56%), Positives = 64/78 (82%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           Y+FTF+LKACA+ C  + G+QIHGL IK+GL +DV++ NTL+++Y + G F+IAR +LDR
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200

Query: 58  LPTKDVVSWNAVLSVYVE 5
           +P +D VSWN++LS Y+E
Sbjct: 201 MPVRDAVSWNSLLSAYLE 218



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/74 (32%), Positives = 43/74 (58%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           +T   +L ACASL S+  G+ +H  + K+G+  + ++   L+ MY+KCG    A  +   
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364

Query: 58  LPTKDVVSWNAVLS 17
              +DV +WN+++S
Sbjct: 365 TSKRDVSTWNSIIS 378


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/78 (52%), Positives = 63/78 (80%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           Y+FTF+LKACA+ C  + G+QIHGL +K+ L +DV++ NTL+++Y + G F+IAR +LDR
Sbjct: 111 YSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDR 170

Query: 58  LPTKDVVSWNAVLSVYVE 5
           +P +D VSWN++LS Y++
Sbjct: 171 MPVRDAVSWNSLLSAYLD 188


>ref|XP_002521565.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539243|gb|EEF40836.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 338

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = -3

Query: 238 YTFTFILKACASLCSIKHGQQIHGLVIKNGLSSDVYICNTLLHMYAKCGCFQIARCLLDR 59
           YTF F+LKAC+SL +I+  QQ+H  +IK G  SDVY  N+LLH YA  G  + AR + DR
Sbjct: 112 YTFPFLLKACSSLSAIEKAQQVHAQIIKLGFGSDVYTTNSLLHAYAASGFIESARIIFDR 171

Query: 58  LPTKDVVSWNAVLSVYVE 5
           +P  D VSWN+++  YV+
Sbjct: 172 IPHPDTVSWNSIIDGYVK 189