BLASTX nr result

ID: Cephaelis21_contig00039690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039690
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              88   6e-16
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              88   8e-16
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              88   8e-16
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               87   1e-15
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    87   1e-15

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/130 (34%), Positives = 67/130 (51%)
 Frame = -3

Query: 394  WDWELLETVLEINVVHFIAGIPPPVANETEDSCV*KLSTCGKFSVTKAYELLSMHMWDQP 215
            WD   L  +L IN++  +   P  + +E ED      ST G  +V+ AY L++ H  D  
Sbjct: 1508 WDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGR 1567

Query: 214  SEEAGRIWKITCPQRVKAFLWLARNQKVMTNDNRAKRGLTDSTDCPQCGCHLESILHVLR 35
            S +   IW+ TC +++K F+W      +M N  R +RGL D+  CP CG   E++ H+ R
Sbjct: 1568 SHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFR 1625

Query: 34   DCPKAREVWD 5
             C  A   WD
Sbjct: 1626 RCLLAEACWD 1635


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/130 (33%), Positives = 66/130 (50%)
 Frame = -3

Query: 394  WDWELLETVLEINVVHFIAGIPPPVANETEDSCV*KLSTCGKFSVTKAYELLSMHMWDQP 215
            WD   L  +L  N++  +   P  + +E ED      ST G  +V+ AY L++ H  D  
Sbjct: 976  WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDR 1035

Query: 214  SEEAGRIWKITCPQRVKAFLWLARNQKVMTNDNRAKRGLTDSTDCPQCGCHLESILHVLR 35
            S +   IW+ TC +++K F+W      +M N  R +RGL D+  CP CG   E++ H+ R
Sbjct: 1036 SHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFR 1093

Query: 34   DCPKAREVWD 5
             C  A   WD
Sbjct: 1094 RCLLAEACWD 1103


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/130 (33%), Positives = 66/130 (50%)
 Frame = -3

Query: 394  WDWELLETVLEINVVHFIAGIPPPVANETEDSCV*KLSTCGKFSVTKAYELLSMHMWDQP 215
            WD   L  +L  N++  +   P  + +E ED      ST G  +V+ AY L++ H  D  
Sbjct: 976  WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDR 1035

Query: 214  SEEAGRIWKITCPQRVKAFLWLARNQKVMTNDNRAKRGLTDSTDCPQCGCHLESILHVLR 35
            S +   IW+ TC +++K F+W      +M N  R +RGL D+  CP CG   E++ H+ R
Sbjct: 1036 SHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFR 1093

Query: 34   DCPKAREVWD 5
             C  A   WD
Sbjct: 1094 RCLLAEACWD 1103


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
 Frame = -3

Query: 394 WDWELLETVLEINVVHFIAGIPPPVANETEDSCV*KLSTCGKFSVTKAYELLSMHMWDQP 215
           WD+  ++     N    +  +   +     D    K S  G+FSV  AYE+L++    +P
Sbjct: 332 WDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRP 391

Query: 214 SEEA--GRIWKITCPQRVKAFLWLARNQKVMTNDNRAKRGLTDSTDCPQCGCHLESILHV 41
           +  +    +WK+  P+RVK FLWL  NQ VMT + R +R L+ S  C  C   +ES+LHV
Sbjct: 392 NMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHV 451

Query: 40  LRDCPKAREVW 8
           LRDCP    +W
Sbjct: 452 LRDCPAQLGIW 462


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
 Frame = -3

Query: 394 WDWELLETVLEINVVHFIAGIPPPVANETEDSCV*KLSTCGKFSVTKAYELLSMHMWDQP 215
           WD+  ++     N    +  +   +     D    K S  G+FSV  AYE+L++    +P
Sbjct: 223 WDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRP 282

Query: 214 SEEA--GRIWKITCPQRVKAFLWLARNQKVMTNDNRAKRGLTDSTDCPQCGCHLESILHV 41
           +  +    +WK+  P+RVK FLWL  NQ VMT + R +R L+ S  C  C   +ES+LHV
Sbjct: 283 NMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHV 342

Query: 40  LRDCPKAREVW 8
           LRDCP    +W
Sbjct: 343 LRDCPAQLGIW 353


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