BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039677
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206...   102   4e-20
ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thalian...    96   3e-18
ref|XP_002863689.1| transcription initiation factor [Arabidopsis...    96   3e-18
gb|ADD09583.1| transcription initiation factor [Trifolium repens]      96   3e-18
ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana] ...    96   3e-18

>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
           gi|449521952|ref|XP_004167993.1| PREDICTED:
           uncharacterized LOC101206316 [Cucumis sativus]
          Length = 898

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/86 (58%), Positives = 66/86 (76%)
 Frame = +1

Query: 70  SSSQAMAAGSGNQPAASALNRGKQVPFALLLPVIQPQLDKDRAMQLNTLYLKLRKNEISK 249
           S+ Q+M A   N P    LNR KQVPFA L+PV+ PQLDKDR MQL TL+ +L++NE++K
Sbjct: 173 SNQQSMVAEQANNP----LNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNK 228

Query: 250 DGFVRHMRSIVGDQMLKMAVYKLQSQ 327
           D F+R MR +VGDQML++AV ++QSQ
Sbjct: 229 DDFIRLMRGVVGDQMLRLAVCQVQSQ 254


>ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thaliana]
           gi|332007531|gb|AED94914.1| TBP-associated factor 4
           [Arabidopsis thaliana]
          Length = 852

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
 Frame = +1

Query: 13  NQQAVATTMGNQQVMPPGTSSSQAMAAGSGNQPA-ASALNRG-KQVPFALLLPVIQPQLD 186
           NQ++ +  M  Q++     SS QA        P   + +NR  KQVPFA LLP +  QLD
Sbjct: 151 NQESESQYMKLQKM-----SSQQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLD 205

Query: 187 KDRAMQLNTLYLKLRKNEISKDGFVRHMRSIVGDQMLKMAVYKLQ 321
           KDRA+QL TLY +L+KNEI K+GF RHM+ IVGDQML+MAV KLQ
Sbjct: 206 KDRALQLRTLYARLKKNEIPKEGFTRHMKDIVGDQMLRMAVSKLQ 250


>ref|XP_002863689.1| transcription initiation factor [Arabidopsis lyrata subsp. lyrata]
           gi|297309524|gb|EFH39948.1| transcription initiation
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
 Frame = +1

Query: 13  NQQAVATTMGNQQVMPPGTSSSQAMAAGSGNQPA-ASALNRG-KQVPFALLLPVIQPQLD 186
           NQ++ +  M  Q++     SS QA        P   + +NR  KQVPFA LLP +  QLD
Sbjct: 153 NQESESQYMKLQKM-----SSQQARGVEPPVNPINVNPMNRNPKQVPFAALLPTLMNQLD 207

Query: 187 KDRAMQLNTLYLKLRKNEISKDGFVRHMRSIVGDQMLKMAVYKLQ 321
           KDRA+QL TLY +L+KNEI K+GF RHM+ IVGDQML+MAV KLQ
Sbjct: 208 KDRALQLRTLYARLKKNEIPKEGFTRHMKDIVGDQMLRMAVSKLQ 252


>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
          Length = 934

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/105 (49%), Positives = 68/105 (64%)
 Frame = +1

Query: 13  NQQAVATTMGNQQVMPPGTSSSQAMAAGSGNQPAASALNRGKQVPFALLLPVIQPQLDKD 192
           N +A+ T   N +             A    QP+ S +NR KQVPF LLLP++ PQL KD
Sbjct: 136 NHEAIKTNTPNCESQYAKLQQMSNQQATVNEQPS-SQVNRSKQVPFGLLLPILIPQLAKD 194

Query: 193 RAMQLNTLYLKLRKNEISKDGFVRHMRSIVGDQMLKMAVYKLQSQ 327
           RAMQL TL+ KL+++EI KD FVR M+ IVGDQML++A+ K+Q Q
Sbjct: 195 RAMQLQTLFNKLKRDEIPKDNFVRLMKGIVGDQMLRIALTKVQQQ 239


>ref|NP_199127.3| TBP-associated factor 4 [Arabidopsis thaliana]
           gi|38490053|gb|AAR21620.1| TATA-binding protein
           associated factor 4b [Arabidopsis thaliana]
           gi|110738778|dbj|BAF01312.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007530|gb|AED94913.1|
           TBP-associated factor 4 [Arabidopsis thaliana]
          Length = 823

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
 Frame = +1

Query: 13  NQQAVATTMGNQQVMPPGTSSSQAMAAGSGNQPA-ASALNRG-KQVPFALLLPVIQPQLD 186
           NQ++ +  M  Q++     SS QA        P   + +NR  KQVPFA LLP +  QLD
Sbjct: 151 NQESESQYMKLQKM-----SSQQARGVEPPVNPMNVNPINRNPKQVPFAALLPTLMNQLD 205

Query: 187 KDRAMQLNTLYLKLRKNEISKDGFVRHMRSIVGDQMLKMAVYKLQ 321
           KDRA+QL TLY +L+KNEI K+GF RHM+ IVGDQML+MAV KLQ
Sbjct: 206 KDRALQLRTLYARLKKNEIPKEGFTRHMKDIVGDQMLRMAVSKLQ 250