BLASTX nr result

ID: Cephaelis21_contig00039617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039617
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|35549...    64   3e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    60   3e-07
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                 60   4e-07

>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 7/186 (3%)
 Frame = +1

Query: 1   SLLRFRSVAKHWRSLIDDPCFIDNHRLRSYNR--SGGIKLLVEREEVGQELMLVDLEGNM 174
           SL+RFR V K W SLI DP F+  H+ +S N+    G+ +  + +      +  D EG  
Sbjct: 49  SLMRFRCVCKTWSSLIRDPFFVKLHQNQSLNKPCKTGLLMSTKHQLFNSHFVFADHEGKQ 108

Query: 175 SPTPHPATQFVLRPGYPVASVEGLICFGD-----IVWNPTTRKSICLPPQCMNVPVYSRF 339
           +      T  + +    +    GL C  +      V+N +TR+S  +PP    + +  R 
Sbjct: 109 A--LEEDTISIPKSSNVLGIANGLACIVNDKHRISVYNLSTRESTTIPPPPQEIRIQDRL 166

Query: 340 DGPLFANEYYLGFDALTKQYKVLSICQMSILRKYTDYNNNIHTAVVDKEKFQIQVFTLGT 519
                      GFD L  +YK++  C                    DKE+F+I  FTLGT
Sbjct: 167 S---------FGFDPLANEYKIVKFC------------------AHDKEQFEI--FTLGT 197

Query: 520 TAWRDI 537
             WR I
Sbjct: 198 ERWRRI 203


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
 Frame = +1

Query: 1   SLLRFRSVAKHWRSLIDDPCFIDNHRLRSYNRSGGIKLLVEREEVGQELMLVDLEGNMSP 180
           S++RFR V++ W S   DP F   H  RS  R  G  LL+   +                
Sbjct: 42  SVVRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGSALLLSYPDPSSSSTSFSFFERKQG 101

Query: 181 TPHPATQFVLRPGYPVASV-EGLICFG-------DIVWNPTTRKSICLPPQCMNVPVYSR 336
             +     V +    ++ +  G++C         DI  N TT+++I LP +  N+P+ S 
Sbjct: 102 FRNLQISHVDQQYTHLSEIIRGILCINYRRSHRVDIC-NITTQETITLP-RSTNIPIRSD 159

Query: 337 ----FDGPLFANEYYLGFDALTKQYKVLSICQMSILRKYTDYNNNIHTAVVDKEKFQIQV 504
               FD  ++   Y  GF++ T+ YKVL+IC ++  +   + NN + T  V +   + ++
Sbjct: 160 AGVDFD-IVYEPRYSFGFNSSTRDYKVLNICSITRYKLQVNPNNGLSTREVSQRTVEFEI 218

Query: 505 FTL----GTTAWRDITYRLPEEE 561
           FT+    G  +WR I    P ++
Sbjct: 219 FTIGCDRGAGSWRKIDPGYPYDQ 241


>ref|XP_003621455.1| F-box protein [Medicago truncatula] gi|355496470|gb|AES77673.1|
           F-box protein [Medicago truncatula]
          Length = 404

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 63/194 (32%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
 Frame = +1

Query: 1   SLLRFRSVAKHWRSLIDDPCFIDNHRLRSYNRSGGIKLLVEREEVGQELMLVD--LEGNM 174
           SLL  + V+K   SLI DP F+ +H   S  R     LL+       EL+LVD  L    
Sbjct: 52  SLLVLKCVSKSLNSLISDPKFVKHHLHLSQTRP--YHLLIR----NSELLLVDSRLPSVT 105

Query: 175 SPTPHPATQFVLRP--GYPVA--SVEGLICFGD--------IVWNPTTRKSICLPPQCMN 318
           +  P     F L P   +P+   S +G+ICF +        +VWNP T K   LPP   N
Sbjct: 106 AIIPDTTHNFRLNPSDNHPIMIDSCDGIICFENRNDNHVDLVVWNPCTGKFKILPP-LEN 164

Query: 319 VPVYSRFDGPLFANEYYLGFDALTKQYKVLSI-CQMSILRKYTDYNNNIHTAVVDKEKFQ 495
           +P     +G      Y +G+D     YKV++  C   I + Y   N+            Q
Sbjct: 165 IP-----NGKTH-TLYSIGYDRFVDNYKVVAFSCHRQINKSYKYCNS------------Q 206

Query: 496 IQVFTLGTTAWRDI 537
           ++V TLGT  WR I
Sbjct: 207 VRVHTLGTNFWRRI 220


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 15/193 (7%)
 Frame = +1

Query: 4   LLRFRSVAKHWRSLIDDPCFIDNHRLRSYNRS--------GGIKLLVEREEVGQELMLVD 159
           +LRFR V K W SLI DP F+      S  R+           K ++    +  +    D
Sbjct: 46  ILRFRCVCKSWNSLISDPKFVKKQLCVSTTRNLHFRNYAYDSRKYILTSYPLDSD--FTD 103

Query: 160 LEGNMSPTPHPATQFVLRPGYPVASVEGLICFGD-------IVWNPTTRKSICLPPQCMN 318
           +  N + +  P  +F       + S  G++C  D       I WNP+TRK          
Sbjct: 104 ITSNFTQSDWPYAKFYRF----IGSCNGIVCLADNEYTSLVICWNPSTRK-------FKE 152

Query: 319 VPVYSRFDGPLFANEYYLGFDALTKQYKVLSICQMSILRKYTDYNNNIHTAVVDKEKFQI 498
           +P++ +    L    +  G+D+    YKV+ +     L +   + N          K Q+
Sbjct: 153 LPLFEKPTTGLNVMTFGFGYDSSKDNYKVVVVLDYQFLDEDYSFVN----------KTQV 202

Query: 499 QVFTLGTTAWRDI 537
            V TLGT  WR I
Sbjct: 203 MVHTLGTNIWRTI 215


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
 Frame = +1

Query: 1   SLLRFRSVAKHWRSLIDDPCFIDNHRLRSYNRSGGIK----LLVEREEV----GQELMLV 156
           S++R + V+K W  +I+ P FI  H    Y     I     L ++ EE     G+ ++ V
Sbjct: 27  SVIRIKCVSKTWYYMINSPDFISIHYNYDYPSKHFIVFKRYLEIDAEESIYYNGKNMLSV 86

Query: 157 DLEGNMSPTPHPATQFVLRP-GYPVAS-VEGLICFGD----IVWNPTTRKSICLPPQCMN 318
               +   +  P T+++    G  +A    G++C G     +++NPT R+   LPP  + 
Sbjct: 87  HCNDDSLKSVAPNTEYLDDYIGVNIAGPCNGIVCIGSYRGIVLYNPTLREFWELPPSILP 146

Query: 319 VPVYSRFDGPLFANEYYL------GFDALTKQYKVLSICQMSILRKYTDYNNNIHTAVVD 480
            P Y   D  L    Y++      GFD  T  YKV+ I + +    + D++N+I      
Sbjct: 147 PPPYLSSDKKL---NYWMDMTMGIGFDPNTNDYKVVRILRPAHEYTFEDFDNHI------ 197

Query: 481 KEKFQIQVFTLGTTAWRDI 537
           ++  +++V+ L T +WR I
Sbjct: 198 RDVSKVEVYNLSTNSWRRI 216


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