BLASTX nr result

ID: Cephaelis21_contig00039581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039581
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase...    62   6e-08
ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase...    59   3e-07

>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
           predicted protein [Populus trichocarpa]
          Length = 1364

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
 Frame = -1

Query: 404 MDNRCISSSV-SLRYRGPFSFSFNEYSCCSNDRFDRNPLLYSSAFESF--PCCSCCANSL 234
           M N  ISS++ S+  +G  SFSFN+YS   ++RF+RNP L  S   S    CC CC ++ 
Sbjct: 1   MHNTYISSTLLSVGTKGSLSFSFNDYSNLLSERFERNPFLLQSCSSSCNKSCCCCCCSAS 60

Query: 233 YS---------RGPVESSSYLCGLRQSNLIQWSPYKRLILNGLDRFNYGRFPIFDVD 90
            S         R P+    +  G RQS +IQ  P +RLIL G DR+ Y R P + +D
Sbjct: 61  SSSFSTTTTIRRAPINPGLFF-GFRQSTIIQCPPSRRLILGGRDRYYY-RSPAYGLD 115


>ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Glycine max]
          Length = 1329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = -1

Query: 404 MDNRCISSSV-SLRYRGPFSFSFNEYSCCSNDRFDRNPLLYSSAFESFPCCSCCANSLYS 228
           M N  +SS++ ++R + PFS SFN YS    +RFDR P   S       CC  C+ S Y 
Sbjct: 1   MSNAYVSSTIYAVRCKEPFSLSFNGYSNFCYERFDRTP---SYCLSCCGCCDYCSVSTY- 56

Query: 227 RGPVESSSYLCGLRQSNLIQWSPYKRLILNGLDRFNYGRFPIFDV 93
           R P++    + GLRQS L+Q S  +RLIL G D +   R P + V
Sbjct: 57  RVPIK-PCLINGLRQSALLQLSASRRLILGGGDHY-LSRLPAYGV 99


>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Vitis vinifera]
          Length = 1342

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/69 (47%), Positives = 42/69 (60%)
 Frame = -1

Query: 311 RFDRNPLLYSSAFESFPCCSCCANSLYSRGPVESSSYLCGLRQSNLIQWSPYKRLILNGL 132
           RFDR PL  SS+     CC+CC  +     P+ +  +L GLRQS LIQW+P +RLIL   
Sbjct: 16  RFDRTPLTSSSS-----CCACCGANFIHGVPI-NPGFLYGLRQSTLIQWAPSRRLILGAG 69

Query: 131 DRFNYGRFP 105
           DR+ Y R P
Sbjct: 70  DRY-YCRLP 77