BLASTX nr result

ID: Cephaelis21_contig00039516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039516
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...    98   8e-19
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...    91   1e-16
ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containin...    88   6e-16

>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   VREKDGGVNSWNDDQRLIHKMKLCKKFYNGEVCPYGQNCNFLHERPDSNFNSVSVDEWPR 180
           ++E D  VN+WNDDQ++I KMKLC+KFYNGE CPYG  CNFLHE P             +
Sbjct: 132 IKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDP------------AK 179

Query: 181 SRTDIPAQRESAAISIGTRGSAVVN---ASAYDRPEIIKPVNPNSDASRA 321
            R D    RES+AISIGT G+ ++N   +S+Y  P  +   +  SDA RA
Sbjct: 180 FRDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSV-SDALRA 228


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = +1

Query: 28  SWNDDQRLIHKMKLCKKFYNGEVCPYGQNCNFLHERPDSNFNSVSVDEWPRSRTDIPAQR 207
           +W DDQR+IHKMKLCKKFYNGE CPYG  CNFLHE P             + R D    R
Sbjct: 134 NWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPS------------KFREDTGRFR 181

Query: 208 ESAAISIGTRGSAVVNAS-AYDRPEIIKPV-NPNSDASRA 321
           ES+AISIGT G A+ + S  ++  E+ +P  N  SDASR+
Sbjct: 182 ESSAISIGTTGQALGHGSGVFNAAEVNRPANNAVSDASRS 221


>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/106 (49%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = +1

Query: 7   EKDGGVNSWNDDQRLIHKMKLCKKFYNGEVCPYGQNCNFLHERPDSNFNSVSVDEWPRSR 186
           E+D    +W+DDQR+IHKMKLCKKFYNGE CPYG  CNFLHE P             + R
Sbjct: 129 EEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPS------------KFR 176

Query: 187 TDIPAQRESAAISIGTRGSAVVNAS-AYDRPEIIKPV-NPNSDASR 318
            D    RES+AISIGT    +++ S      E+ KPV N  +DA R
Sbjct: 177 DDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYR 222


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/86 (52%), Positives = 53/86 (61%)
 Frame = +1

Query: 4   REKDGGVNSWNDDQRLIHKMKLCKKFYNGEVCPYGQNCNFLHERPDSNFNSVSVDEWPRS 183
           RE++ G   W++DQR+IHKMKLCKKFYNGE CPYG  CNFLHE P             + 
Sbjct: 131 REEERGTKIWDEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDP------------KKF 178

Query: 184 RTDIPAQRESAAISIGTRGSAVVNAS 261
           R D    RES AISIGT G  + + S
Sbjct: 179 RDDSARPRESFAISIGTTGPPMEHGS 204


>ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 345

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/104 (45%), Positives = 57/104 (54%)
 Frame = +1

Query: 7   EKDGGVNSWNDDQRLIHKMKLCKKFYNGEVCPYGQNCNFLHERPDSNFNSVSVDEWPRSR 186
           E+   +  W+DDQ++IHKMKLCKK+YNGE CPYG  C+FLHE P             R R
Sbjct: 129 ERPPTMGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDP------------ARFR 176

Query: 187 TDIPAQRESAAISIGTRGSAVVNASAYDRPEIIKPVNPNSDASR 318
            D    RES AISIGT GS      A +  E  + VN   +  R
Sbjct: 177 DDSVRYRESTAISIGTNGSPKSYGDASNNLESNRAVNTGLNVFR 220


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