BLASTX nr result

ID: Cephaelis21_contig00039483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039483
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...    82   4e-14
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    75   4e-12
ref|NP_180299.1| F-box protein [Arabidopsis thaliana] gi|7526758...    60   1e-07

>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
 Frame = -1

Query: 284 GKDCLVILQEAMD-GKRRKGEVGEEKRIYEMFLEIRREWKVRKQNRERRLDMVCIATGVS 108
           G+D LVIL+EA + G+RR+GE G+E+  Y+ FL+ +REWK RK+ RE  LD VCIATGV+
Sbjct: 269 GEDSLVILKEATERGERRRGEDGKER--YKEFLKRKREWKERKERRESVLDWVCIATGVT 326

Query: 107 IFMAFWIFVLFR 72
            F+AFW F+LFR
Sbjct: 327 SFLAFWSFILFR 338


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
 Frame = -1

Query: 284 GKDCLVILQEAMD-GKRRKGEVGEE-KRIYEMFLEIRREWKVRKQNRERRLDMVCIATGV 111
           GK+ LV++QEAM+ G+RRKG+ G E K  YE F+E +RE K RKQ  E+ LDMVCI TG+
Sbjct: 270 GKESLVVIQEAMERGERRKGKCGTEGKGRYEEFVERKRERKARKQKMEKVLDMVCIVTGI 329

Query: 110 SIFMAFWIFVLFR 72
           +IF++ W F+LFR
Sbjct: 330 TIFVSSWSFILFR 342


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -1

Query: 284 GKDCLVILQEAMD-GKRRKGEVGEE-KRIYEMFLEIRREWKVRKQNRERRLDMVCIATGV 111
           GKD LVILQEAM+ G+RRKG+ G+E K  YE F+E ++E K R +  E+ LDM CIATG+
Sbjct: 272 GKDGLVILQEAMERGERRKGKGGKEGKGRYEEFVERKKERKERMKKLEKALDMACIATGI 331

Query: 110 SIFMAFWIFVLF 75
           ++F++FW F+LF
Sbjct: 332 AVFVSFWTFILF 343


>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = -1

Query: 284 GKDCLVILQEAMDGKRRKGEVGEE-KRIYEMFLEIRREWKVRKQNRERRLDMVCIATGVS 108
           GK+ LVILQEA++  RRK   GEE K  YE +LE+  E + R+  RE+ LDMVCIA GV+
Sbjct: 265 GKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGERRERRLRREKTLDMVCIALGVT 324

Query: 107 IFMAFWIFVLF 75
           IF++FW + LF
Sbjct: 325 IFLSFWSYFLF 335


>ref|NP_180299.1| F-box protein [Arabidopsis thaliana]
           gi|75267580|sp|Q9XIN8.1|FB119_ARATH RecName: Full=F-box
           protein At2g27310 gi|13877667|gb|AAK43911.1|AF370592_1
           Unknown protein [Arabidopsis thaliana]
           gi|5306266|gb|AAD41998.1| unknown protein [Arabidopsis
           thaliana] gi|330252877|gb|AEC07971.1| F-box protein
           [Arabidopsis thaliana]
          Length = 337

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = -1

Query: 284 GKDCLVILQEAMDGKR--RKGEVGEEKRIYEMFLEIRREWKVRKQNRERRLDMVCIATGV 111
           G+D LVILQ  +DGKR  +  E    K  YE ++ ++ +W+  K+ RE+  D +C+  G 
Sbjct: 265 GRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMKIQWRENKERREKAQDTICMIFGF 324

Query: 110 SIFMAFWIFVLFR 72
           S+F+  W F+L R
Sbjct: 325 SMFVLLWSFILLR 337


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