BLASTX nr result

ID: Cephaelis21_contig00039470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039470
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   8e-14
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...    81   8e-14
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    77   2e-12
ref|XP_002337404.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   1e-11

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = +1

Query: 1   EKLGGANKNRNGCKQFRQCVQDINMLDLGFK*AKLTWSSGN-----IHERIDRALSNLKF 165
           EK+GG    +   KQ +  +    +LDLGF+  K TW++G      I ER+DRAL N ++
Sbjct: 148 EKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEW 207

Query: 166 LEMFPNVQVHNLQKIKSDHRPLLIQTELGMDSKHQRPFRFLSLWIMHQDFSNLVTRNW 339
           L++FP+ +V +L +  SDH PLLI       S+   PFR   +W  H DF+N++   W
Sbjct: 208 LDLFPDTKVIHLPRTFSDHCPLLILFNENPRSE-SFPFRCKEVWAYHPDFTNVIEETW 264


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
 Frame = +1

Query: 1   EKLGGANKNRNGCKQFRQCVQDINMLDLGFK*AKLTWSS------GNIHERIDRALSNLK 162
           EK GG  + +N   +F+Q ++   + DLGF+    TW +       +I ER+DRA++N +
Sbjct: 394 EKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQSKGESHIRERLDRAVANFE 453

Query: 163 FLEMFPNVQVHNLQKIKSDHRPLLIQTE---LGMDSKHQRPFRFLSLWIMHQDFSNLVTR 333
           +L  FP V+V N     SDHR L++ TE   +G   K Q PF+F + W+  + F ++V  
Sbjct: 454 WLAKFPLVRVKNGDTYHSDHRALVVCTEDDLVGRKPKAQGPFKFEAEWLKEEGFKDIVKE 513

Query: 334 NW--VGN-GALAATIK 372
            W  VG+ G+L++ +K
Sbjct: 514 GWESVGDVGSLSSKVK 529


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
 Frame = +1

Query: 1    EKLGGANKNRNGCKQFRQCVQDINMLDLGFK*AKLTWSSGN-----IHERIDRALSNLKF 165
            EK GG        K FR  + + ++ DL FK    +W +       I ER+DRAL N+ +
Sbjct: 751  EKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAW 810

Query: 166  LEMFPNVQVHNLQKIKSDHRPLLIQTELGMDSKHQRPFRFLSLWIMHQDFSNLVTRNW-- 339
                PN Q+ +L KI SDHRPLL+ +   M +K  R FRF  +W  H+++S+++ R+W  
Sbjct: 811  SSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNK-TRLFRFEQMWTTHEEYSDVIQRSWPP 869

Query: 340  -VGNGALAATIKNFFEAAK 393
              G  A+ +  +N     K
Sbjct: 870  AFGGSAMRSWNRNLLSCGK 888


>ref|XP_002337404.1| predicted protein [Populus trichocarpa] gi|222838981|gb|EEE77332.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
 Frame = +1

Query: 13  GANKNRNGCKQFRQCVQDINMLDLGFK*AKLTWSSGNIHERIDRALSNLKFLEMFPNVQV 192
           G+++  +   +F+ C+   N+++L     K TWS GN   RIDR   +  +L+ FP+  +
Sbjct: 163 GSSQITSSMTRFKNCIDGCNLMELPLNGRKFTWSRGNAASRIDRIFVSGDWLQTFPSSTL 222

Query: 193 HNLQKIKSDHRPLLIQTELGMDSKH--QRPFRFLSLWIMHQDFSNLVTRNW 339
             L K  SDHRPL     L +DS +   +PFRF++ W +  DF N++   W
Sbjct: 223 FGLSKYSSDHRPL----HLLLDSTNWGPKPFRFMNCWWLVSDFRNMIQSFW 269


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
 Frame = +1

Query: 1   EKLGGANKNRNGCKQFRQCVQDINMLDLGFK*AKLTWSSGN-----IHERIDRALSNLKF 165
           EK GGA +       FR+ + D  + DLG+   + TW  GN     I ER+DR L+N ++
Sbjct: 146 EKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEW 205

Query: 166 LEMFPNVQVHNLQKIKSDHRPLLIQTELGMDSKHQRP---FRFLSLWIMHQDFSNLVTRN 336
            + FP+ +V +L + +SDH PLL++T  G++   +R    F+F ++W+  ++   +V   
Sbjct: 206 CDNFPSWEVVHLPRYRSDHAPLLLKT--GVNDSFRRGNKLFKFEAMWLSKEECGKIVEEA 263

Query: 337 WVGNGALAATIKN 375
           W  NG+    I N
Sbjct: 264 W--NGSAGEDITN 274


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