BLASTX nr result

ID: Cephaelis21_contig00039396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039396
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    93   2e-17
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   5e-11
ref|XP_004144274.1| PREDICTED: uncharacterized protein LOC101204...    71   8e-11
ref|XP_004135786.1| PREDICTED: putative ribonuclease H protein A...    69   4e-10
gb|AAY23271.1| retrotransposon protein, putative, unclassified [...    69   5e-10

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/88 (47%), Positives = 61/88 (69%)
 Frame = -3

Query: 265 ITGFSHKGIPIKYLGCPLFYGRKNKVYFSELLESFRSKIQSWSNKFLSKGSRLLLIKHVL 86
           IT  +H+  PIKYLGCPL  G+K   +F+EL+++  ++I+ W NK LS G R++LIKHVL
Sbjct: 659 ITCMNHQEFPIKYLGCPLISGKKKTSHFNELVKNIINRIKGWHNKLLSTGGRVVLIKHVL 718

Query: 85  SSIPTHLMAVLDPPVGIIQDMERLMANF 2
            +IPTHL+  L P  G + ++E  +A F
Sbjct: 719 LAIPTHLLVALQPTKGTLDNIEIYLARF 746


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/77 (44%), Positives = 47/77 (61%)
 Frame = -3

Query: 232 KYLGCPLFYGRKNKVYFSELLESFRSKIQSWSNKFLSKGSRLLLIKHVLSSIPTHLMAVL 53
           KYLG P   GR  KV F ELL+    K++ W  K LS+  + +LIK V+ ++PT+LM V 
Sbjct: 756 KYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVY 815

Query: 52  DPPVGIIQDMERLMANF 2
             PV +IQ++   MA F
Sbjct: 816 KLPVAVIQEIHSAMARF 832


>ref|XP_004144274.1| PREDICTED: uncharacterized protein LOC101204302 [Cucumis sativus]
          Length = 175

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/87 (39%), Positives = 51/87 (58%)
 Frame = -3

Query: 262 TGFSHKGIPIKYLGCPLFYGRKNKVYFSELLESFRSKIQSWSNKFLSKGSRLLLIKHVLS 83
           TG S   +P KYLG  +  G   K  ++ L E FR K   W N  LSKG RL L++ VL+
Sbjct: 74  TGCSVDNLPFKYLGFSIGRGHNRKEMWNNLEERFRHKFDRWRNVSLSKGGRLTLVQSVLN 133

Query: 82  SIPTHLMAVLDPPVGIIQDMERLMANF 2
           S+P +L ++   P+G+I  +E+++  F
Sbjct: 134 SLPCYLFSLAQAPIGVINRLEQMIRKF 160


>ref|XP_004135786.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 347

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/87 (39%), Positives = 50/87 (57%)
 Frame = -3

Query: 262 TGFSHKGIPIKYLGCPLFYGRKNKVYFSELLESFRSKIQSWSNKFLSKGSRLLLIKHVLS 83
           TG S    P KYLG  +  G   K  ++ L E F+ K   W N  LSKG RL L++ VL+
Sbjct: 31  TGCSIDNPPFKYLGFSIGRGHNRKEMWNNLEERFKHKFDKWRNVSLSKGGRLTLVQSVLN 90

Query: 82  SIPTHLMAVLDPPVGIIQDMERLMANF 2
           S+P +L ++   PVG+I  +E+++  F
Sbjct: 91  SLPCYLFSLAQAPVGVINRLEQMIRKF 117


>gb|AAY23271.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77548971|gb|ABA91768.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 885

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -3

Query: 259 GFSHKGIPIKYLGCPLFYGRKNKVYFSELLESFRSKIQSWSNKFLSKGSRLLLIKHVLSS 80
           G S    P +YLG P+ Y R     + E++E F  ++ SW  K LS G RL LI  VLSS
Sbjct: 737 GCSTGQFPFRYLGIPIHYRRLRNADWKEVVECFEKRLSSWKGKLLSTGGRLTLINSVLSS 796

Query: 79  IPTHLMAVLDPPVGIIQDMERLMANF 2
           +P ++M+    P+GI+  ++   + F
Sbjct: 797 LPLYMMSFFAIPIGILTKLDYFRSRF 822


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