BLASTX nr result

ID: Cephaelis21_contig00039344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039344
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   179   6e-43
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...   179   8e-43
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   172   1e-40
ref|NP_194257.1| pentatricopeptide repeat-containing protein [Ar...   168   1e-39
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   163   4e-38

>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  179 bits (454), Expect = 6e-43
 Identities = 84/134 (62%), Positives = 101/134 (75%)
 Frame = +3

Query: 3   TFVSLLSACAHLGMVEDGESLFTIMRKKYDISPITEHYACMVNLYGRAGFIDKAHDIIVN 182
           TFVSLLSACAHLG+V+DGE LF++MR+ Y + P  EHYACMVNLYGRAG I++A++II  
Sbjct: 380 TFVSLLSACAHLGLVKDGEGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEIIEK 439

Query: 183 KMEGEAGPTVWGALLYGCYLHGNIDXXXXXXXXXXXXXPDNEQNFELLMNIYANADRIDG 362
           +ME EAGPTVWGALLY CY H N+D             PDNE NFELLMNIY N  R++ 
Sbjct: 440 RMEFEAGPTVWGALLYACYFHHNVDIGKIAAECLFELEPDNEHNFELLMNIYRNVGRLED 499

Query: 363 VEEVRSMMSERGLD 404
           VE+VR MM++RG D
Sbjct: 500 VEKVRKMMADRGFD 513


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  179 bits (453), Expect = 8e-43
 Identities = 86/133 (64%), Positives = 101/133 (75%)
 Frame = +3

Query: 3   TFVSLLSACAHLGMVEDGESLFTIMRKKYDISPITEHYACMVNLYGRAGFIDKAHDIIVN 182
           TFVSLLSACAHLG+V+DGE LF++M+ KY I+PI EHYACMVNLYGRAG I++A+ II +
Sbjct: 310 TFVSLLSACAHLGLVKDGERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRD 369

Query: 183 KMEGEAGPTVWGALLYGCYLHGNIDXXXXXXXXXXXXXPDNEQNFELLMNIYANADRIDG 362
           +ME EAGPTVWGALLY CYLH N+D             PDNE NFELLM IY NA R++ 
Sbjct: 370 QMEFEAGPTVWGALLYSCYLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLED 429

Query: 363 VEEVRSMMSERGL 401
            E VR MM +RGL
Sbjct: 430 AERVRKMMVDRGL 442


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
            lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
            ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  172 bits (435), Expect = 1e-40
 Identities = 82/134 (61%), Positives = 99/134 (73%)
 Frame = +3

Query: 3    TFVSLLSACAHLGMVEDGESLFTIMRKKYDISPITEHYACMVNLYGRAGFIDKAHDIIVN 182
            TFVS+LS CA+ GMVEDGE LF++M K+Y I+P  EHYACMVNLYGRAG +++A+ +IV 
Sbjct: 624  TFVSVLSLCANTGMVEDGERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEEAYSMIVQ 683

Query: 183  KMEGEAGPTVWGALLYGCYLHGNIDXXXXXXXXXXXXXPDNEQNFELLMNIYANADRIDG 362
            +ME EAGPTVWGALLY CYLHGN D             PDNE NFELLM IY+ A R + 
Sbjct: 684  EMEFEAGPTVWGALLYACYLHGNTDIGEVSAQRLFELEPDNEHNFELLMRIYSKAKRAED 743

Query: 363  VEEVRSMMSERGLD 404
            VE VR M+ +RGL+
Sbjct: 744  VERVRQMLVDRGLE 757


>ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 527

 Score =  168 bits (425), Expect = 1e-39
 Identities = 81/134 (60%), Positives = 97/134 (72%)
 Frame = +3

Query: 3   TFVSLLSACAHLGMVEDGESLFTIMRKKYDISPITEHYACMVNLYGRAGFIDKAHDIIVN 182
           TFVS+LS CA+ GMVEDGE LF++M K+Y I P  EHYACMVNLYGRAG +++A+ +IV 
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452

Query: 183 KMEGEAGPTVWGALLYGCYLHGNIDXXXXXXXXXXXXXPDNEQNFELLMNIYANADRIDG 362
           +M  EAGPTVWGALLY CYLHGN D             PDNE NFELL+ IY+ A R + 
Sbjct: 453 EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512

Query: 363 VEEVRSMMSERGLD 404
           VE VR MM +RGL+
Sbjct: 513 VERVRQMMVDRGLE 526


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  163 bits (413), Expect = 4e-38
 Identities = 78/134 (58%), Positives = 95/134 (70%)
 Frame = +3

Query: 3   TFVSLLSACAHLGMVEDGESLFTIMRKKYDISPITEHYACMVNLYGRAGFIDKAHDIIVN 182
           TFVSLLS CAHLG+V++G  L+ +M+ KY I P  EHYACMVNLYGRAG I++A+ II  
Sbjct: 355 TFVSLLSTCAHLGLVKEGXELYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKIITK 414

Query: 183 KMEGEAGPTVWGALLYGCYLHGNIDXXXXXXXXXXXXXPDNEQNFELLMNIYANADRIDG 362
            ME EAGPT+WGALLY CYLH ++D             PDNE NFELLM IY NA R + 
Sbjct: 415 GMEIEAGPTIWGALLYACYLHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSED 474

Query: 363 VEEVRSMMSERGLD 404
            + V+ MM+ERGL+
Sbjct: 475 EKRVKLMMAERGLN 488


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