BLASTX nr result

ID: Cephaelis21_contig00039338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00039338
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...    73   3e-11
ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...    70   2e-10
ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   1e-09
ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   1e-09
ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   2e-09

>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = -3

Query: 196 SFRMTMEGGRERLVYMWGYLPGALPEXXXXXXXXXXXXXXXLAAGTSWKDVCGGGCGFAV 17
           + ++ ME  +ERLVYMWGYLPGALP+                 +G SWKDVCGGGCGFA+
Sbjct: 8   AMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPP---SGYSWKDVCGGGCGFAM 64

Query: 16  AISDP 2
           AIS+P
Sbjct: 65  AISEP 69


>ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = -3

Query: 166 ERLVYMWGYLPGALPEXXXXXXXXXXXXXXXLAAGTSWKDVCGGGCGFAVAISD 5
           E++VYMWGYLPGA PE                 AG SWKDVCGGGCGFA+AIS+
Sbjct: 61  EKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISE 114


>ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 472

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = -3

Query: 166 ERLVYMWGYLPGALPEXXXXXXXXXXXXXXXLAAGTSWKDVCGGGCGFAVAISD 5
           + LVYMWGYLPGALP+               +  G SWK+VCGGGCGFA+AISD
Sbjct: 6   DALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISD 59


>ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 485

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/54 (55%), Positives = 35/54 (64%)
 Frame = -3

Query: 166 ERLVYMWGYLPGALPEXXXXXXXXXXXXXXXLAAGTSWKDVCGGGCGFAVAISD 5
           + LVYMWGYLPGALP+               +  G SWK+VCGGGCGFA+AISD
Sbjct: 19  DALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISD 72


>ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -3

Query: 181 MEGGRERLVYMWGYLPGALPEXXXXXXXXXXXXXXXLAAGTSWKDVCGGGCGFAVAISDP 2
           M+  +E LVYMWGYLPGALP+                 +G  WKDVCGGGCGFA+AIS+P
Sbjct: 9   MQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPP---SGYFWKDVCGGGCGFAMAISEP 65